Mp1g01860



Description

Annotation

Database ID Description
ProSiteProfiles PS50011 Protein kinase domain profile.
CDD cd14066 STKc_IRAK
Pfam PF00582 Universal stress protein family
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF07714 Protein tyrosine and serine/threonine kinase
SUPERFAMILY SSF52402 Adenine nucleotide alpha hydrolases-like
SMART SM00220 serkin_6
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
FunFam G3DSA:1.10.510.10:FF:000095 protein STRUBBELIG-RECEPTOR FAMILY 8
Gene3D G3DSA:3.40.50.12370 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
CDD cd00293 USP_Like
FunFam G3DSA:3.30.200.20:FF:000015 Somatic embryogenesis receptor kinase 1
PANTHER PTHR47987 OS08G0249100 PROTEIN
KOG KOG1187 Serine/threonine protein kinase; [T]
MapolyID Mapoly0029s0060 -
GO GO:0006468 protein phosphorylation
GO GO:0004672 protein kinase activity
GO GO:0005524 ATP binding

Nomenclature

Gene symbol Product Transcript ID Status
MpRLK-Pelle_RLCK-Via Receptor-like Kinase (RLK) Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp1g01860.1 chr1:2034473..2040763 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g01860.2 chr1:2034473..2040763 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g01860 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g01860 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.