Mp1g02820



Description

Annotation

Database ID Description
KEGG K14440 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
KOG KOG1000 Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily; [B]
PANTHER PTHR45766:SF3 SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A-LIKE PROTEIN 1
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd18010 DEXHc_HARP_SMARCAL1
SMART SM00490 helicmild6
Gene3D G3DSA:3.40.50.10810 -
Coils Coil Coil
Pfam PF00271 Helicase conserved C-terminal domain
ProSiteProfiles PS51467 HARP domain profile.
PANTHER PTHR45766 DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER
Pfam PF00176 SNF2 family N-terminal domain
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
Gene3D G3DSA:3.40.50.300 -
CDD cd18793 SF2_C_SNF
SMART SM00487 ultradead3
MapolyID Mapoly0113s0030 -

Nomenclature

Gene symbol Product Transcript ID Status
Mpsnf1.1 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g02820.1 chr1:3105007..3115010 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.