Mp1g04300
Description
Annotation
| Database | ID | Description |
|---|---|---|
| FunFam | G3DSA:1.10.287.990:FF:000001 | Superoxide dismutase |
| SUPERFAMILY | SSF46609 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| Gene3D | G3DSA:1.10.287.990 | Fe,Mn superoxide dismutase (SOD) domain |
| PRINTS | PR01703 | Manganese superoxide dismutase signature |
| ProSitePatterns | PS00088 | Manganese and iron superoxide dismutases signature. |
| Pfam | PF00081 | Iron/manganese superoxide dismutases, alpha-hairpin domain |
| FunFam | G3DSA:3.55.40.20:FF:000002 | Superoxide dismutase |
| SUPERFAMILY | SSF54719 | Fe,Mn superoxide dismutase (SOD), C-terminal domain |
| PIRSF | PIRSF000349 | MnSOD_FeSOD |
| Pfam | PF02777 | Iron/manganese superoxide dismutases, C-terminal domain |
| Gene3D | G3DSA:3.55.40.20 | - |
| PANTHER | PTHR11404 | SUPEROXIDE DISMUTASE 2 |
| KEGG | K04564 | superoxide dismutase, Fe-Mn family [EC:1.15.1.1] |
| KOG | KOG0876 | Manganese superoxide dismutase; [P] |
| MapolyID | Mapoly0005s0177 | - |
| GO | GO:0006801 | superoxide metabolic process |
| GO | GO:0004784 | superoxide dismutase activity |
| GO | GO:0046872 | metal ion binding |
| GO | GO:0005739 | mitochondrion |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpSOD1 | Superoxido dismutase | Published |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp1g04300 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g04300.1 TTGGCCGCGC TCTCCAAGAA GCTAGATTGT CTCTGAGCTC GCGGATCTGG ATCAGTCGAG AGCTGCAGGG GAGTTTTGGA GACCTTAGGG ACGAAGGTCG AGTGGTTCAC TAGAGAGCGA GCGAGAGTCG AGCAGCAACG CGATCGAAAG GAAGCGAGAA GCTATGGCCG CAATGCAGGC GTCGATGGCT ATCAAAAGAG GCACCTCGAC CGTCGCCTGC ACAGCGAGGA ACTTGTTGGG TTTGCAGAGA GGGTTTAGCA CCTCGTACAA GGAGCACGGT TACACTCTAC CAGATCTGCC TTATGGTTAT GGGGAGTTAG AACCTGCCAT CAGTGGAGAC ATCATGCAAT TGCACCACTC GAAGCATCAT CAGGCTTACA TCACCGGCTT CAATCAGGCG CTCGAAAAGC TTGACGCAGC TCATTCTAGT CGCGATCCAC AAACTATTGT CCAGCTCCAG GCTGCTCTCA AGTTCAACGG TGGAGGTTGG TTTCTATCCC TATTTTCTTG GAGTTCTAAT CTCCCCACTG ATAAGGGCTA AATCTAGTAC TGTTGATCTT CACTGCAAAT TTCCCTCTCT TTCTTTGCGG TAAAGTTTTT TTTGTCTACT CGCATGGAGC CGAATATGTG GTGGACTTCT TTGGACCTGT CAGAGGGATT GATACCGACT GACACATTTG TGTGTAACCT GTTGAGACCC TCTAGAAATA GACGGTACGG TATGCATGAA GAGATTCTTC ATATACTCGT AACTAGATCT AGTTCCAGAA ACTTACCATG TTAAGTACAC CACCACCACC TTGTGGCTGT GGCTTGAGGG AAGCATAGAG GAAGTAGTTT TCTTGTCACC GATGCTCTAA ACTGGCACTT TCCTATAGTG AAACAGTTTT GCAACTTCAA CGGACGTTTG GAGTTTTAGT GTGCTCGCTA CTTGGAATCC ACTGCCCGAT CTAGGCTTCT CCCGTTTGCA CTCTGGTTCA CTTCCTGGAA ACTTCGTCTC TGCTCGTGAA TTTTTCTGGC CAATCTGATA CAGGTTCGAG TAAATATTAC GATCTAGCAG AGTAAGAATG AGATTTTTGA TGAGATAATT CCTCATATTC TCTCGTTTTC ATTTGGTGTT TCTTCCAGGC CATGTTAACC ACAGCATCTT TTGGAAGAAT CTAGCACCCA TAAAGGTTAG TAAAATCACG GTCCGAGGTT CGTGTACATC ATATAATGCA CGAGTTAATT TTTGAGCTAT TTTCTTTATT GTTGATACGC AAAATAGTCT AATTCCCACC GTTGAATTGA CCTCTCGATT ATATGAGAAC ACTGGTTACC AGCACAACTG TAAACCCTAT GTGGCTAAAG GCCAAATGCA TCTGAGCGGG TTCCCAAAGG CGTATATATG CATTCTTTTG ATGATTATCG GGACTAGGCT GGCCACGTTG GAAGTTTTAC ACCCGATCAT TTCCGAAGAA AACTTTGCAA TGAGTCTTAT GGGTTCAGTG TTTGGCCTTA CAGGAAGGAG GAGGTGTTCC TCCTGAAGGG TCGTTGGCAT CTGCTATTGA GGCTGAGTTT GGTTCTCTCG AAATTCTAAA AGCGAAGATG GTTGCTGGAG GTGTAGGAGT TCAAGGATCA GGCTGGGTGG TATGCATCAA CTAAATAAGC TGGGTTCATT TTGGCTGTAA TGTGAAATTT GTGTCTAAAG GTTTATGTTG GACATAAGAA ACTGAGCTTC TAGTTATGAT CCGTGTCAAA TGGCAGTTGC AATGGGGAAG CTTATGTCTG TATGTATGTA TACCTCTCTA TATATATGGA GATGCTCCTG AAGATATTCG AAATACTAAT TAGATTAATG GTTTGGTCTG CAGTGGCTAG GTTTAAACAA AGACCTAAAA AAGCTCGTTG TGGAGACCAC AGCAAATCAG GCAAGAATAT ATTCAGGTCT TCACTTTTTT GCAGTTCAGG ATATTGTGGG ATATTGACGT TCTTGCGAGA TTTAGTGGTG ACGCTGACTC CCTTGTTGAC TTCGATTTTT TGTATGTTTC CGCAGGATCC TTTGGTTACC AAAGGACTGA TTCCATTGTT GGGGATCGAT GTTTGGGAAC ATGCTTACTA CCTACAGGTA GGCAACTGGA TGTCTGCAAT TTGTACATGG TTTGCTTTGA GCATGGTCGG TCGGTGTGTT ACTCAAGAAA TGATTCTCTT ATGTCATCAA GATAAGAGGG GTTAGAGCAT CAGGTCGGTT TTAGCCCTGA CTAGCAGGAT CCGCATGGCA TTAAGAAGAA TGGAGATTTG AAGTGTTGTG TGATTATGTA TCTTCCTCTT TTCAGCGTTT CCGGTAGTGC TTGACTGATG GAAGCCATGG TAAGAAAATT TGGGTAAAAA ATTGAGTCAA AATTTTAAAA CCTTGGGTGT CTTCTGGTGG CTTACATTCT TGACCGTCAT TGAGTTTCAC TGCATACGAA TAGGACATTT TCTGAGAGCT GGATCCGACT TGGTTCCTTA ATGGGTGGTC GATGTCAAAG CCTTGTGTTT GTGGTTTTTG GGTTGAACTC ACCACAGGAA CCAGTCTTAT CGAACGGATT TTTTCTTACC GATATTCCTG GAACTGTTTG TGTGCAGTAC AAAAATGTTC GCCCTGACTA CTTGAAAAAC ATCTGGAAAG TGGTGAACTG GAAGGATGTC TCATCTCGAT ACGAGGAAAA TGTTTGATAT AGATCGTTGA GGGTAAGTCA CCATGTCAAA TATGTCCACC CTTGTCCGTT CATGACTTTT CAGTGAGACA TGGAGGGCAA TGCTGGTGAA ACTTAAGGTG AGGAAGAGGT TTCAGGAGAG GTCTTGGATG GCCTAGTCCA TTCATCTTAA CATGTATATA TGCGGGAGTA TGCTTCAAAA TTATTCTGGC AGAAGATCCT TGCATTGTGT TAATTTATCG AGTGCAATAG AGTTTTTTTC TCACATCTGT ATGAGAAGCA TAAGACTTGA GATCGAAAGT ACATTGCAGA ACATGTCCTT TCGTCCAATT GAATTGCTGT TGGAGTTCTA CTGTTCCGTC CAAATGCATG TGGATGGATG GTTATTCCCT TTGATCAGAG TGGCATTCCA GGTAAAATTG TGAGGAGAGC AGTCTTCGCT GAGCGCTGTT TTCTCTGATT TGGTGGTTGT TGTGTATGCC TGCGTTTGAT ATACTTATAG ATGATATGTA AATCAGCGTG TGAAAGTGAT GCATATGGAT CAATTTTAGA TAACCTGTGG TTTCTCTTGC ACTTGCCATA ACCTTCTCTT GCACTTGCCA TACCCTTCTC TTGCACTTGC CATACGTACA GTCTAATTCA AGTTAATACT CAGATAAATT CTAGGCAATG TTCTTCAGGT CAAAACTCTG AATGTGACAC TCCTTGCCTT GATCCAAGTT CAAGTTCCAT CTCAAACTCA GCTGGACTGC TGTAACCATC TTCACATCCC TGTAATCCAA CAGTTGTGAT CAGTACGTGA AGGAATGATC ATTGGCAAGG TGTGATCTGA TTGTTTTACT ATTTTAACAA GAGTTTTTCT ATTTTCAGCT TTGAGCTTGG ATACACAAAA TCGAAACCCC AAATCTTGGT AGCTGGTGTG TTATTGGTCA CAAAAGTAGC CTTGAAGTAA ATCACCACTA CCTTATAACT CAGCCAAGCC AAATTACAGT CTCTAGTCAA TGAGTACTCG TATGGTCTGA CTCCGAGATT AATCAACAAT ATTATAAGTG AAGTAATTTA AATTCCAGTC CTAAACCAAA TTGAAGCTGA GTATCTGGTA GAAAGGAACT TCCAGTCAAC CAGGTGAAAC AGCCGAGCAT GAACTAATAA AGTATTATTT ACAGGCGCAG TTCTCCCCCC GCTCTTTTAT GTGTTACTTG TATTGATCTT GCTGAGTATA CATAGTGCGT GGCGTAACTA CATAAATAGC ACCGGTTTCA TAGTCACCTG TTTCACCTGC TTGATTGGCA GATTCGTGAT GTTGCTTCGA GCTAAAATAC TACTGCAGCT CAAATACTAC ATCCAACCGT ATGCTGTCTC TTTGCTTATA TTTGTAGATT CTCTACATAC GAACAAGAGA AGTTTGTCAT GTGCAACAGC GATGTACACA AAATGGTCTA TGGGAGTTTC ATCATCTACC ACAGTTGTAA TTCAACAGTG GTCTGGCGTC CATGACTTAA GCGCGGTGAC AGCGATTCCC GAGATAACGT GTTTTCACAT AGCACCTGTG AAACTGACAC CTTGTAATTC GCATGAGCTT TTGTTCACGG TGTAAATTCT ACCTCTTCTT TCAATGAATT CTGCCGTCGC AAGTGGTGAT TTTTGAAAAC TTCTGAATTA ACCATATATC TGTAGTTGCC TCATACCAAA GCAGCCGTAT TCTGGGACAC ACTTACCTCT TATGGCTCCT TCTAACTGAG GTTTAGTGTG GCCTCTTTCT AGAGTGTGTC GCCAGGAAGC GGTGAATAAA CAATCTTTCA ACGCGATGGC CATGAATCTG AAATGTGCCA CCGTGTGCTT CACAATCTGT GCTTCTCTGC AAGAGATGAG TAGTGGGGAG CACGAAAAGA GTTGCAAACC TTGAGGGTGC AAATGGATGG ATTCATGGAT GCTGGACAGC ACTTCCTCGT CCACGATCTT CAGACCGGTG GACTCACAAG GTGCCTTGCC CACCGGAAGG ACGGGCGATA CAAACGTTTG CCAAACTAGG GTATATTGTA TCCACCGGCC ATAAAATGAA AACAATTTGC TCGAAGGTCA TGGAAGGTTT TTGCTTATGG TACAGAAGAG AGGCTTTTTT GTGTAACCAA AACTGCACAC TACGGTAAAG CTGTGAGAGC ATTGTCGTGA TGGAGACAAA GTGTGCTTGC TGACAGTTGA CCGAGGATAT TTACAACTGT AAGTACCTCG TTTGAATAGA CCTGAAGATA AGTTAGCTAG AAATCTAGAA GTAAAGTCCG TGAAGCTGAA AGTGCTTCTA CCTTTCTGAG TAATGTACCA AACTTAACCA CGTTAGTTTC GGGTGGCATC AAAGGACACA GTGGCTATGA TTATGTGAAG AGATCAGCAT TCGAGAACTT CATTTTTCCT TAACAGTTGT TCAATAATTT GA |
mRNA UTR + CDS |
| >Mp1g04300.1 TTGGCCGCGC TCTCCAAGAA GCTAGATTGT CTCTGAGCTC GCGGATCTGG ATCAGTCGAG AGCTGCAGGG GAGTTTTGGA GACCTTAGGG ACGAAGGTCG AGTGGTTCAC TAGAGAGCGA GCGAGAGTCG AGCAGCAACG CGATCGAAAG GAAGCGAGAA GCTATGGCCG CAATGCAGGC GTCGATGGCT ATCAAAAGAG GCACCTCGAC CGTCGCCTGC ACAGCGAGGA ACTTGTTGGG TTTGCAGAGA GGGTTTAGCA CCTCGTACAA GGAGCACGGT TACACTCTAC CAGATCTGCC TTATGGTTAT GGGGAGTTAG AACCTGCCAT CAGTGGAGAC ATCATGCAAT TGCACCACTC GAAGCATCAT CAGGCTTACA TCACCGGCTT CAATCAGGCG CTCGAAAAGC TTGACGCAGC TCATTCTAGT CGCGATCCAC AAACTATTGT CCAGCTCCAG GCTGCTCTCA AGTTCAACGG TGGAGGCCAT GTTAACCACA GCATCTTTTG GAAGAATCTA GCACCCATAA AGGAAGGAGG AGGTGTTCCT CCTGAAGGGT CGTTGGCATC TGCTATTGAG GCTGAGTTTG GTTCTCTCGA AATTCTAAAA GCGAAGATGG TTGCTGGAGG TGTAGGAGTT CAAGGATCAG GCTGGGTGTG GCTAGGTTTA AACAAAGACC TAAAAAAGCT CGTTGTGGAG ACCACAGCAA ATCAGGATCC TTTGGTTACC AAAGGACTGA TTCCATTGTT GGGGATCGAT GTTTGGGAAC ATGCTTACTA CCTACAGTAC AAAAATGTTC GCCCTGACTA CTTGAAAAAC ATCTGGAAAG TGGTGAACTG GAAGGATGTC TCATCTCGAT ACGAGGAAAA TGTTTGATAT AGATCGTTGA GGGTAAGTCA CCATGTCAAA TATGTCCACC CTTGTCCGTT CATGACTTTT CAGTGAGACA TGGAGGGCAA TGCTGGTGAA ACTTAAGGTG AGGAAGAGGT TTCAGGAGAG GTCTTGGATG GCCTAGTCCA TTCATCTTAA CATGTATATA TGCGGGAGTA TGCTTCAAAA TTATTCTGGC AGAAGATCCT TGCATTGTGT TAATTTATCG AGTGCAATAG AGTTTTTTTC TCACATCTGT ATGAGAAGCA TAAGACTTGA GATCGAAAGT ACATTGCAGA ACATGTCCTT TCGTCCAATT GAATTGCTGT TGGAGTTCTA CTGTTCCGTC CAAATGCATG TGGATGGATG GTTATTCCCT TTGATCAGAG TGGCATTCCA GGTAAAATTG TGAGGAGAGC AGTCTTCGCT GAGCGCTGTT TTCTCTGATT TGGTGGTTGT TGTGTATGCC TGCGTTTGAT ATACTTATAG ATGATATGTA AATCAGCGTG TGAAAGTGAT GCATATGGAT CAATTTTAGA TAACCTGTGG TTTCTCTTGC ACTTGCCATA ACCTTCTCTT GCACTTGCCA TACCCTTCTC TTGCACTTGC CATACGTACA GTCTAATTCA AGTTAATACT CAGATAAATT CTAGGCAATG TTCTTCAGGT CAAAACTCTG AATGTGACAC TCCTTGCCTT GATCCAAGTT CAAGTTCCAT CTCAAACTCA GCTGGACTGC TGTAACCATC TTCACATCCC TGTAATCCAA CAGTTGTGAT CAGTACGTGA AGGAATGATC ATTGGCAAGG TGTGATCTGA TTGTTTTACT ATTTTAACAA GAGTTTTTCT ATTTTCAGCT TTGAGCTTGG ATACACAAAA TCGAAACCCC AAATCTTGGT AGCTGGTGTG TTATTGGTCA CAAAAGTAGC CTTGAAGTAA ATCACCACTA CCTTATAACT CAGCCAAGCC AAATTACAGT CTCTAGTCAA TGAGTACTCG TATGGTCTGA CTCCGAGATT AATCAACAAT ATTATAAGTG AAGTAATTTA AATTCCAGTC CTAAACCAAA TTGAAGCTGA GTATCTGGTA GAAAGGAACT TCCAGTCAAC CAGGTGAAAC AGCCGAGCAT GAACTAATAA AGTATTATTT ACAGGCGCAG TTCTCCCCCC GCTCTTTTAT GTGTTACTTG TATTGATCTT GCTGAGTATA CATAGTGCGT GGCGTAACTA CATAAATAGC ACCGGTTTCA TAGTCACCTG TTTCACCTGC TTGATTGGCA GATTCGTGAT GTTGCTTCGA GCTAAAATAC TACTGCAGCT CAAATACTAC ATCCAACCGT ATGCTGTCTC TTTGCTTATA TTTGTAGATT CTCTACATAC GAACAAGAGA AGTTTGTCAT GTGCAACAGC GATGTACACA AAATGGTCTA TGGGAGTTTC ATCATCTACC ACAGTTGTAA TTCAACAGTG GTCTGGCGTC CATGACTTAA GCGCGGTGAC AGCGATTCCC GAGATAACGT GTTTTCACAT AGCACCTGTG AAACTGACAC CTTGTAATTC GCATGAGCTT TTGTTCACGG TGTAAATTCT ACCTCTTCTT TCAATGAATT CTGCCGTCGC AAGTGGTGAT TTTTGAAAAC TTCTGAATTA ACCATATATC TGTAGTTGCC TCATACCAAA GCAGCCGTAT TCTGGGACAC ACTTACCTCT TATGGCTCCT TCTAACTGAG GTTTAGTGTG GCCTCTTTCT AGAGTGTGTC GCCAGGAAGC GGTGAATAAA CAATCTTTCA ACGCGATGGC CATGAATCTG AAATGTGCCA CCGTGTGCTT CACAATCTGT GCTTCTCTGC AAGAGATGAG TAGTGGGGAG CACGAAAAGA GTTGCAAACC TTGAGGGTGC AAATGGATGG ATTCATGGAT GCTGGACAGC ACTTCCTCGT CCACGATCTT CAGACCGGTG GACTCACAAG GTGCCTTGCC CACCGGAAGG ACGGGCGATA CAAACGTTTG CCAAACTAGG GTATATTGTA TCCACCGGCC ATAAAATGAA AACAATTTGC TCGAAGGTCA TGGAAGGTTT TTGCTTATGG TACAGAAGAG AGGCTTTTTT GTGTAACCAA AACTGCACAC TACGGTAAAG CTGTGAGAGC ATTGTCGTGA TGGAGACAAA GTGTGCTTGC TGACAGTTGA CCGAGGATAT TTACAACTGT AAGTACCTCG TTTGAATAGA CCTGAAGATA AGTTAGCTAG AAATCTAGAA GTAAAGTCCG TGAAGCTGAA AGTGCTTCTA CCTTTCTGAG TAATGTACCA AACTTAACCA CGTTAGTTTC GGGTGGCATC AAAGGACACA GTGGCTATGA TTATGTGAAG AGATCAGCAT TCGAGAACTT CATTTTTCCT TAACAGTTGT TCAATAATTT GA |
CDS |
| >Mp1g04300.1 ATGGCCGCAA TGCAGGCGTC GATGGCTATC AAAAGAGGCA CCTCGACCGT CGCCTGCACA GCGAGGAACT TGTTGGGTTT GCAGAGAGGG TTTAGCACCT CGTACAAGGA GCACGGTTAC ACTCTACCAG ATCTGCCTTA TGGTTATGGG GAGTTAGAAC CTGCCATCAG TGGAGACATC ATGCAATTGC ACCACTCGAA GCATCATCAG GCTTACATCA CCGGCTTCAA TCAGGCGCTC GAAAAGCTTG ACGCAGCTCA TTCTAGTCGC GATCCACAAA CTATTGTCCA GCTCCAGGCT GCTCTCAAGT TCAACGGTGG AGGCCATGTT AACCACAGCA TCTTTTGGAA GAATCTAGCA CCCATAAAGG AAGGAGGAGG TGTTCCTCCT GAAGGGTCGT TGGCATCTGC TATTGAGGCT GAGTTTGGTT CTCTCGAAAT TCTAAAAGCG AAGATGGTTG CTGGAGGTGT AGGAGTTCAA GGATCAGGCT GGGTGTGGCT AGGTTTAAAC AAAGACCTAA AAAAGCTCGT TGTGGAGACC ACAGCAAATC AGGATCCTTT GGTTACCAAA GGACTGATTC CATTGTTGGG GATCGATGTT TGGGAACATG CTTACTACCT ACAGTACAAA AATGTTCGCC CTGACTACTT GAAAAACATC TGGAAAGTGG TGAACTGGAA GGATGTCTCA TCTCGATACG AGGAAAATGT TTGA |
Protein |
| >Mp1g04300.1 MAAMQASMAI KRGTSTVACT ARNLLGLQRG FSTSYKEHGY TLPDLPYGYG ELEPAISGDI MQLHHSKHHQ AYITGFNQAL EKLDAAHSSR DPQTIVQLQA ALKFNGGGHV NHSIFWKNLA PIKEGGGVPP EGSLASAIEA EFGSLEILKA KMVAGGVGVQ GSGWVWLGLN KDLKKLVVET TANQDPLVTK GLIPLLGIDV WEHAYYLQYK NVRPDYLKNI WKVVNWKDVS SRYEENV |