Mp1g04330



Description

Annotation

Database ID Description
Gene3D G3DSA:3.30.70.1620 -
Gene3D G3DSA:3.40.50.300 -
Coils Coil Coil
Pfam PF06470 SMC proteins Flexible Hinge Domain
SUPERFAMILY SSF75553 Smc hinge domain
Pfam PF02463 RecF/RecN/SMC N terminal domain
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Gene3D G3DSA:1.20.1060.20 -
FunFam G3DSA:3.40.50.300:FF:000278 Structural maintenance of chromosomes 2
CDD cd03273 ABC_SMC2_euk
FunFam G3DSA:3.40.50.300:FF:000385 Structural maintenance of chromosomes 2
PANTHER PTHR43977 STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3
SMART SM00968 SMC_hinge_2
PIRSF PIRSF005719 SMC
KEGG K06674 structural maintenance of chromosome 2
KOG KOG0933 Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E); [BD]
MapolyID Mapoly0005s0174 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSMC2 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g04330.1 chr1:4724469..4733869 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.