Mp1g04530



Description

Annotation

Database ID Description
Pfam PF07714 Protein tyrosine and serine/threonine kinase
PANTHER PTHR47989 OS01G0750732 PROTEIN
Gene3D G3DSA:3.10.100.10 -
ProSiteProfiles PS50041 C-type lectin domain profile.
ProSiteProfiles PS50011 Protein kinase domain profile.
Pfam PF00059 Lectin C-type domain
CDD cd00037 CLECT
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
SMART SM00034 CLECT_2
SUPERFAMILY SSF56436 C-type lectin-like
FunFam G3DSA:1.10.510.10:FF:000393 C-type lectin receptor-like tyrosine-protein kinase At1g52310
KOG KOG1187 Serine/threonine protein kinase; [T]
MapolyID Mapoly1925s0001 -
GO GO:0006468 protein phosphorylation
GO GO:0004672 protein kinase activity
GO GO:0005524 ATP binding

Nomenclature

Gene symbol Product Transcript ID Status
MpRLK-Pelle_C-LEC2 Receptor-like Kinase (RLK) Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp1g04530.1 chr1:4891786..4895949 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g04530.2 chr1:4891773..4895949 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g04530 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g04530 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.