Mp1g04640



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
ProSitePatterns PS00633 Bromodomain signature.
Gene3D G3DSA:1.20.920.10 -
ProSiteProfiles PS50014 Bromodomain profile.
PANTHER PTHR47809 DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN
SUPERFAMILY SSF47370 Bromodomain
Pfam PF00439 Bromodomain
SMART SM00297 bromo_6
PRINTS PR00503 Bromodomain signature
KOG KOG1474 Transcription initiation factor TFIID, subunit BDF1 and related bromodomain proteins; C-term missing; [K]
MapolyID Mapoly0005s0143 -
GO GO:0005515 protein binding

Nomenclature

Gene symbol Product Transcript ID Status
MpBromo1 Chromatin related protein Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp1g04640.1 chr1:4991212..4996785 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g04640 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g04640 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.