Mp1g05680



Description

Annotation

Database ID Description
CDD cd12195 CIPK_C
CDD cd14663 STKc_SnRK3
FunFam G3DSA:1.10.510.10:FF:000279 Non-specific serine/threonine protein kinase
FunFam G3DSA:3.30.200.20:FF:000096 Non-specific serine/threonine protein kinase
FunFam G3DSA:3.30.310.80:FF:000002 Non-specific serine/threonine protein kinase
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
Gene3D G3DSA:3.30.310.80 Kinase associated domain 1, KA1
KEGG K07198 5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.31]
KOG KOG0583 Serine/threonine protein kinase; [T]
PANTHER PTHR43895 CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED
Pfam PF00069 Protein kinase domain
Pfam PF03822 NAF domain
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
ProSiteProfiles PS50011 Protein kinase domain profile.
ProSiteProfiles PS50816 NAF domain profile.
SMART SM00220 serkin_6
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
GO GO:0005524 ATP binding
GO GO:0004672 protein kinase activity
GO GO:0004674 protein serine/threonine kinase activity
GO GO:0006468 protein phosphorylation
GO GO:0007165 signal transduction
MapolyID Mapoly0005s0039 -

Nomenclature

Gene symbol Product Transcript ID Status
MpCIPK-A CBL-interacting protein kinase Published

Associated Literature (AI-based literature mining)

CBL-interacting protein kinase (from nomenclature)

0 core 1 peripheral

Tansley, C., et al. (2023) · New Phytologist  research experimental tool
CBL-interacting kinase in a bryophyte-specific clade; salt-downregulated and osmotic-insensitive; binds all MpCBLs and Arabidopsis CBL4 in yeast and in planta, possibly via nonspecific interactions.

Transcript models

Transcript ID Location Sequences Extract region
Mp1g05680.1 chr1:6111947..6120242 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g05680 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g05680 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.