Mp1g06210



Description

Annotation

Database ID Description
Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal
FunFam G3DSA:2.60.120.330:FF:000079 Protein SRG1
ProSiteProfiles PS51471 Fe(2+) 2-oxoglutarate dioxygenase domain profile.
SUPERFAMILY SSF51197 Clavaminate synthase-like
Gene3D G3DSA:2.60.120.330 -
Pfam PF03171 2OG-Fe(II) oxygenase superfamily
PANTHER PTHR47991 OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE
MobiDBLite mobidb-lite consensus disorder prediction
KEGG K24028 salicylic acid 3-hydroxylase [EC:1.14.11.-]
KOG KOG0143 Iron/ascorbate family oxidoreductases; [QR]
MapolyID Mapoly0043s0013 -

Nomenclature

Gene symbol Product Transcript ID Status
MpDOXC1 Secondary metabolism enzyme Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp1g06210.1 chr1:6731389..6733788 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g06210 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g06210 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.