Mp1g07390



Description

Annotation

Database ID Description
KOG KOG0384 Chromodomain-helicase DNA-binding protein; C-term missing; [K]
KOG KOG3910 Helix loop helix transcription factor; C-term missing; [K]
KOG KOG3598 Thyroid hormone receptor-associated protein complex, subunit TRAP230; N-term missing; [K]
KOG KOG1245 Chromatin remodeling complex WSTF-ISWI, large subunit (contains heterochromatin localization, PHD and BROMO domains); N-term missing; [B]
KOG KOG1015 Transcription regulator XNP/ATRX, DEAD-box superfamily; C-term missing; [K]
KOG KOG1015 Transcription regulator XNP/ATRX, DEAD-box superfamily; N-term missing; [K]
KOG KOG0612 Rho-associated, coiled-coil containing protein kinase; N-term missing; C-term missing; [T]
KOG KOG1873 Ubiquitin-specific protease; N-term missing; C-term missing; [O]
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50016 Zinc finger PHD-type profile.
Coils Coil Coil
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
ProSitePatterns PS01359 Zinc finger PHD-type signature.
SMART SM00249 PHD_3
Gene3D G3DSA:3.40.50.10810 -
SMART SM00298 chromo_7
CDD cd15532 PHD2_CHD_II
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
SUPERFAMILY SSF54160 Chromo domain-like
ProSiteProfiles PS50013 Chromo and chromo shadow domain profile.
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain
Pfam PF00176 SNF2 family N-terminal domain
PANTHER PTHR45623 CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED
Pfam PF06465 Domain of Unknown Function (DUF1087)
Gene3D G3DSA:2.40.50.40 -
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
PANTHER PTHR45623:SF13 HELICASE PROTEIN MOM1-LIKE ISOFORM X1
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
Gene3D G3DSA:3.40.50.300 -
MapolyID Mapoly0043s0132 -

Nomenclature

Gene symbol Product Transcript ID Status
Mpsnf1.4 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g07390.1 chr1:7701667..7733365 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.