Mp1g07990



Description

Annotation

Database ID Description
Pfam PF00856 SET domain
ProSiteProfiles PS50868 Post-SET domain profile.
ProSiteProfiles PS51215 AWS domain profile.
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF17907 AWS domain
PANTHER PTHR22884 SET DOMAIN PROTEINS
SUPERFAMILY SSF82199 SET domain
SMART SM00317 set_7
SMART SM00570 shorttest3
ProSiteProfiles PS50280 SET domain profile.
Gene3D G3DSA:2.170.270.10 SET domain
KOG KOG4442 Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis; C-term missing; [U]
MapolyID Mapoly0036s0043 -
GO GO:0005634 nucleus
GO GO:0005515 protein binding
GO GO:0042054 histone methyltransferase activity
GO GO:0000785 chromatin
GO GO:0006355 regulation of DNA-templated transcription
GO GO:0046975 histone H3K36 methyltransferase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpASHH1 Chromatin related protein Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp1g07990.1 chr1:8565292..8571507 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g07990 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g07990 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.