Mp1g08860



Description

Annotation

Database ID Description
CDD cd00082 HisKA
CDD cd16922 HATPase_EvgS-ArcB-TorS-like
CDD cd19933 REC_ETR-like
FunFam G3DSA:1.10.287.130:FF:000004 Ethylene receptor 1
FunFam G3DSA:3.30.450.40:FF:000026 Ethylene response sensor
FunFam G3DSA:3.30.565.10:FF:000030 Ethylene receptor 1
FunFam G3DSA:3.40.50.2300:FF:000192 Ethylene receptor
Gene3D G3DSA:1.10.287.130 -
Gene3D G3DSA:3.30.450.40 -
Gene3D G3DSA:3.30.565.10 -
Gene3D G3DSA:3.40.50.2300 -
KEGG K14509 ethylene receptor [EC:2.7.13.-]
KOG KOG0519 Sensory transduction histidine kinase; [T]
PANTHER PTHR24423 TWO-COMPONENT SENSOR HISTIDINE KINASE
PIRSF PIRSF026389 Ethylen_sen_hybr_HK
PRINTS PR00344 Bacterial sensor protein C-terminal signature
Pfam PF00072 Response regulator receiver domain
Pfam PF00512 His Kinase A (phospho-acceptor) domain
Pfam PF01590 GAF domain
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ProSiteProfiles PS50109 Histidine kinase domain profile.
ProSiteProfiles PS50110 Response regulatory domain profile.
SMART SM00065 gaf_1
SMART SM00387 HKATPase_4
SMART SM00388 HisKA_10
SMART SM00448 REC_2
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase
SUPERFAMILY SSF52172 CheY-like
SUPERFAMILY SSF55781 GAF domain-like
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
GO GO:0051740 ethylene binding
GO GO:0016772 transferase activity, transferring phosphorus-containing groups
GO GO:0038199 ethylene receptor activity
GO GO:0005789 endoplasmic reticulum membrane
GO GO:0009723 response to ethylene
GO GO:0000155 phosphorelay sensor kinase activity
GO GO:0000160 phosphorelay signal transduction system
GO GO:0005515 protein binding
GO GO:0016310 phosphorylation
GO GO:0004672 protein kinase activity
GO GO:0005783 endoplasmic reticulum
GO GO:0007165 signal transduction
MapolyID Mapoly0036s0126 -

Nomenclature

Gene symbol Product Transcript ID Status
MpETR1 Ethylene related protein, potentially binds ethylene Published

Associated Literature (AI-based literature mining)

Ethylene related protein, potentially binds ethylene; Genome paper MpETR1: Mapoly0036s0126 MpETR2: Mapoly0001s0284 MpETR3: Mapoly0028s0036 (from nomenclature)

0 core 1 peripheral

Li, D., et al. (2020a) · Nature Plants  research experimental comparator
Ethylene receptor (Mp1g08860); ethylene perception.

Transcript models

Transcript ID Location Sequences Extract region
Mp1g08860.1 chr1:9383482..9391737 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g08860.2 chr1:9383542..9391578 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g08860 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g08860 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.