Mp1g09960



Description

Annotation

Database ID Description
SMART SM00369 LRR_typ_2
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor
Pfam PF13855 Leucine rich repeat
FunFam G3DSA:3.80.10.10:FF:000233 Leucine-rich repeat receptor-like protein kinase TDR
SUPERFAMILY SSF52047 RNI-like
SMART SM00220 serkin_6
Pfam PF08263 Leucine rich repeat N-terminal domain
FunFam G3DSA:3.80.10.10:FF:000275 Leucine-rich repeat receptor-like protein kinase
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
FunFam G3DSA:3.30.200.20:FF:000292 Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
ProSiteProfiles PS51450 Leucine-rich repeat profile.
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
FunFam G3DSA:3.80.10.10:FF:000299 Piriformospora indica-insensitive protein 2
SUPERFAMILY SSF52058 L domain-like
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
PANTHER PTHR48056 LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED
Pfam PF00560 Leucine Rich Repeat
Pfam PF00069 Protein kinase domain
ProSiteProfiles PS50011 Protein kinase domain profile.
FunFam G3DSA:1.10.510.10:FF:000400 MDIS1-interacting receptor like kinase 1
KOG KOG1187 Serine/threonine protein kinase; [T]
KOG KOG0472 Leucine-rich repeat protein; [S]
MapolyID Mapoly0096s0005 -
GO GO:0006468 protein phosphorylation
GO GO:0004672 protein kinase activity
GO GO:0005515 protein binding
GO GO:0005524 ATP binding

Nomenclature

Gene symbol Product Transcript ID Status
MpTDR leucine rich repeat receptor kinase Published

Associated Literature (AI-based literature mining, Beta-version)

MpTDR, the TDIF-type receptor, mediates MpCLE1 function; knockout mutants were insensitive to MpCLE1 overexpression. MpTDR:GUS was detected in the dorsal apical meristem.

1 core 6 peripheral

Hirakawa, Y., et al. (2019) · PLoS Genetics  research experimental subject
MpTDR, the TDIF-type receptor, mediates MpCLE1 function; knockout mutants were insensitive to MpCLE1 overexpression. MpTDR:GUS was detected in the dorsal apical meristem.
Hirakawa, Y., et al. (2020) · Current Biology  research citation comparator
Receptor for MpCLE1 (distinct from MpCLV1) mediating cell-proliferation control; cited from prior work to contrast the two independent CLE signaling pathways.
Takahashi, G., et al. (2021) · Frontiers in Plant Science  research experimental comparator
TDIF receptor that weakly associates with MpCIK in co-IP, implicated in MpCLE1 signaling.
Furumizu, C., et al. (2023) · New Phytologist  research citation background
Review: TDIF receptor (TDR) through which MpCLE1 signals.
Furumizu, C., et al. (2021) · Plant Cell  review citation background
TDIF receptor; proliferative activity

Transcript models

Transcript ID Location Sequences Extract region
Mp1g09960.1 chr1:10550865..10556843 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g09960 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g09960 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.