Mp1g10030



Description

Annotation

Database ID Description
PANTHER PTHR31251 SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4
Gene3D G3DSA:4.10.1100.10 -
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF103612 SBT domain
FunFam G3DSA:4.10.1100.10:FF:000001 Squamosa promoter-binding-like protein 14
Pfam PF03110 SBP domain
ProSiteProfiles PS51141 Zinc finger SBP-type profile.
MapolyID Mapoly0014s0223 -
GO GO:0005634 nucleus
GO GO:0003677 DNA binding

Nomenclature

Gene symbol Product Transcript ID Status
MpSPL2 SQUAMOSA PROMOTER BINDING-LIKE, transcription factor Published
Involved in, but not essential for, reproductive development

Associated Literature (AI-based literature mining, Beta-version)

SBP-box (SQUAMOSA PROMOTER BINDING-LIKE) TF; target of miR529c. Involved in (but not essential for) the reproductive transition; its repression by miR529c prevents premature gametangia formation.

2 core 9 peripheral

Alisha A, Jarmolowski A, Szweykowska-Kulinska Z, Sierocka I. (2026) · The Plant journal : for cell and molecular biology  research experimental subject
SPL-family gene downregulated in Mpspl3 knockout plants here, indicating MpSPL3 acts upstream of the miR529c-MpSPL2 module driving the vegetative-to-reproductive phase transition.
Tsuzuki, M., et al. (2019) · Current Biology  research experimental subject
SBP-box (SQUAMOSA PROMOTER BINDING-LIKE) TF; target of miR529c. Involved in (but not essential for) the reproductive transition; its repression by miR529c prevents premature gametangia formation.
Kanesaka, Y., et al. (2023) · Frontiers in Plant Science  research citation background
Cited as part of the miR156/529-SPL module; miR529c restricts MpSPL2 activity to block reproductive transition under SD.
Aggarwal, B., et al. (2024) · RNA Biology  research citation background
Cited from prior work as the MpmiR529c target (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2) with developmental roles.
Flores-Sandoval, E., et al. (2018b) · Frontiers in Plant Science  research sequence comparator
miRNA target (MpmiR529c) reported as orthologous to Arabidopsis SPL3-5 in cross-species comparison.

Transcript models

Transcript ID Location Sequences Extract region
Mp1g10030.1 chr1:10675664..10681242 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g10030 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g10030 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.