Mp1g10300



Description

Annotation

Database ID Description
KEGG K12572 PAB-dependent poly(A)-specific ribonuclease subunit 3
KOG KOG3741 Poly(A) ribonuclease subunit; N-term missing; [A]
KOG KOG1677 CCCH-type Zn-finger protein; N-term missing; C-term missing; [R]
SUPERFAMILY SSF90229 CCCH zinc finger
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
Pfam PF18101 Pan3 Pseudokinase domain
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
Pfam PF00642 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
SMART SM00356 c3hfinal6
PANTHER PTHR12272 DEADENYLATION COMPLEX SUBUNIT PAN3
ProSiteProfiles PS50103 Zinc finger C3H1-type profile.
Coils Coil Coil
CDD cd00180 PKc
Gene3D G3DSA:4.10.1000.10 CCCH zinc finger
MapolyID Mapoly0014s0196 -

Nomenclature

Gene symbol Product Transcript ID Status
MpC3H6 transcription factor, C3H Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g10300.1 chr1:10635456..10647905 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g10300.2 chr1:10635456..10647905 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.