Mp1g11250



Description

Annotation

Database ID Description
ProSiteProfiles PS50893 ATP-binding cassette, ABC transporter-type domain profile.
ProSiteProfiles PS50106 PDZ domain profile.
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Gene3D G3DSA:3.40.50.300 -
PANTHER PTHR19241 ATP-BINDING CASSETTE TRANSPORTER
Pfam PF00005 ABC transporter
CDD cd03232 ABCG_PDR_domain2
FunFam G3DSA:3.40.50.300:FF:003489 ABC transporter G family member 39
Pfam PF19055 ABC-2 type transporter
SMART SM00382 AAA_5
Pfam PF01061 ABC-2 type transporter
KOG KOG0065 Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily; [Q]
MapolyID Mapoly0014s0102 -
GO GO:0140359 ABC-type transporter activity
GO GO:0005524 ATP binding
GO GO:0005515 protein binding
GO GO:0016887 ATP hydrolysis activity
GO GO:0016020 membrane

Nomenclature

Gene symbol Product Transcript ID Status
MpABCG26 ABC transporters Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp1g11250.1 chr1:11748523..11766029 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g11250 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g11250 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.