Mp1g13200



Description

Annotation

Database ID Description
CDD cd14066 STKc_IRAK
SMART SM00220 serkin_6
Pfam PF00069 Protein kinase domain
ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
FunFam G3DSA:1.10.510.10:FF:000240 Lectin-domain containing receptor kinase A4.3
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
FunFam G3DSA:3.30.200.20:FF:000039 receptor-like protein kinase FERONIA
ProSiteProfiles PS50011 Protein kinase domain profile.
PANTHER PTHR27007 -
KOG KOG1187 Serine/threonine protein kinase; [T]
MapolyID Mapoly0019s0090 -
GO GO:0006468 protein phosphorylation
GO GO:0005886 plasma membrane
GO GO:0004672 protein kinase activity
GO GO:0005524 ATP binding

Nomenclature

Gene symbol Product Transcript ID Status
MpRLK-Pelle_L-LEC2 Receptor-like Kinase (RLK) Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp1g13200.1 chr1:13571315..13575551 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g13200 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g13200 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.