Mp1g15800



Description

Annotation

Database ID Description
KOG KOG0553 TPR repeat-containing protein; C-term missing; [R]
KOG KOG2084 Predicted histone tail methylase containing SET domain; C-term missing; [B]
SUPERFAMILY SSF48452 TPR-like
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00317 set_7
Gene3D G3DSA:2.170.270.10 SET domain
CDD cd20071 SET_SMYD
Pfam PF00856 SET domain
ProSiteProfiles PS50005 TPR repeat profile.
Gene3D G3DSA:1.25.40.10 -
Pfam PF13432 Tetratricopeptide repeat
ProSiteProfiles PS50280 SET domain profile.
SUPERFAMILY SSF82199 SET domain
PANTHER PTHR47643 TPR DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_5G12710)
SMART SM00028 tpr_5
ProSiteProfiles PS50293 TPR repeat region circular profile.
MapolyID Mapoly0033s0081 -

Nomenclature

Gene symbol Product Transcript ID Status
MpATXR1 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g15800.1 chr1:16015083..16023525 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.