Mp1g16880
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:1.10.20.10 | Histone, subunit A |
| PANTHER | PTHR10252 | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| FunFam | G3DSA:1.10.20.10:FF:000038 | dr1-associated corepressor homolog |
| Pfam | PF00808 | Histone-like transcription factor (CBF/NF-Y) and archaeal histone |
| Coils | Coil | Coil |
| SUPERFAMILY | SSF47113 | Histone-fold |
| KEGG | K21752 | Dr1-associated corepressor |
| KOG | KOG1659 | Class 2 transcription repressor NC2, alpha subunit (DRAP1); C-term missing; [K] |
| MapolyID | Mapoly0001s0028 | - |
| GO | GO:0005634 | nucleus |
| GO | GO:0016251 | RNA polymerase II general transcription initiation factor activity |
| GO | GO:0046982 | protein heterodimerization activity |
| GO | GO:0001046 | core promoter sequence-specific DNA binding |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpCCAAT-NFYC5 | transcription factor, CCAAT-NFYC | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp1g16880 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g16880.1 GACGGACTCG ACACCTGAGG AGAAGGAGCG AGCGCGAGAG AGAAAGAGCG GAACAAGAGA AGGGAGCACG CTACGAGAGA GAGAGGAGAG AGAGGAGAGA GAGGGAGAGG GAGAGAGAGA GAGAGAGAGA GCGCGCAGAT AGAGCCAGCA ACGAGCGGTA CCAGGGTCGA CGGGGCGGGG CTTTGAAGGG CAGGAAGTGG AAGGAAAGGA AACCACGGGC AAGAAAGCCA GAGACAAGGT CGACGGGTCG ACGGGCAGGA GGAGGAGACT CAGGAAAGCA CCAGGGCAGT CGCGGAGAAA GCGTTGCTGG AGAGAACGAC CGACCGACCG AACGTCCGGA GGGGAGAAGT TGTAGCAGGT GGTCGAACGA ACGGGCCGAG ACGAGAAGAG TCGAGGTGGA CGCGTTGCTG AGACTGGATG AGGCAAGTCG GTCGAGCAGC AGCAAGCAGC ACTGATCAAG AAATCTACTT CTGATTCTGT CGAGCGCGAT TGGGGTCCGC TGGGCTGCAG ATTGTGTAGG AGGTGGTGTT TAATGGATGA CGATTGTTAG TGTCTGGCCC CGTTTTCGTC CTGAGAAAAT TAGGGAATTT ATTTTCTGTC TGGTAGTTTC GTAATTGTGG AAGCGAAAGC GCTAGAGGCC GGCGGGTGAA GGAAGATTCA AATGACTAGA GGGTAAAGAT GATGGGTCTG TAGGCCGCCT GGTCTTGTGT TACGGAGAGA CTCGAGTGAA TTTATCTCGG TCTCTGGGGT AGCAGTTCTT CTGCAATGGC GATGACAGAG GAGTTCGTGG TGTGCTCCAG GCACGCGTAG GGTACGGTAC CGAACATTGC TGTGGAAAGG AGACTGCAAG GCCTCGAGAA TGGCCTTGAG CGACAGCGTA TGTTTCGAGC AAACTGTGCG CATGCGTTAG AAAGGCGACA GGGTATGACT CGAGTGGAGT GAAGGTTTTC TTATGCCGGC CTTTACGAAC CAGGGTTGCC ACTTTGGGGA CATTAGGTTG AAGCTTTGCG GAAATTATAA GTGGAGTTTT TCCGAAACTT ACTGTGGGCT CGAAAACCAG GGTCCAACAT GAAAAAGAAA CTGGATACCC GTTTTCCTGC GGTGAGTTGG CCCTCTGGCT ACTGCGCTAT ATTTCATTGC ATGTTAGAGC GGTTCACGAA ATCTGTAGAT TGAACCTTCC TATGTGGCAG CCAGCTGTGA TGAGACCCTT AGGCTTACTA CTACATACCA CCTTGATTCC CTGTCTCTGT CTACTTGGAT ATTTGCAATG CAATTTATTC TTCTAAGTTC AAATGTCTCA AAAGTTGGAA GCACCCAGTC TTATTTATCC TCTTCGCTTG TTTTAATTTT TAGCTCTGTT CTCCACGAAT GAGCAATAAT TTTACTTTCG GTGTTCTATA CTTCATGCTT CTCGACGGAC GCAGGCTCGA ATCAAGAAGA TCATGCAGGC GGATGAAGAA GTCGGAAAGA TAGCAATGGC GACGCCCGTT CTGATTTGTA AGAAATATCG TTTTTCACGT CTTTCTTGGA TCTGTAGTAG AAGAAAGGCC TCTATAGCAT GATTCAGTGC AAAAATCTGG ATTTGGCCGA CCCTCTCATC TTTAGCACGT CTGTGTTGCA GCCAAGGCTC TTGAGCTTTT TCTTCAAAAT TTATGTGACA AGACTTATGA AATTACCCTC AGAAGGGGAG CCAAAACCAT GAGCGCCCTG CATTTGTAAG TACTAAGCTG ATCACTTCAT GTTCTACCTC GTCTACTATC TCCTCAAAAT ATAATAGCAA TGAACTAGGT TAGATAAACT AGAACAACCA GAAAATGTGC TGAGCATATC TTCTTCTACG TTTTGTGCAA CGTTTATGCA GGTTGCTACT CTTGCGGTAA AGATATGCTC GCTGATTTAC GTTGTAAGCA AGAAACTTCT TTCTTGACCC TATTGTGGTC GGATATGTTT GCAGGAAGCA GTGTGTACAA CAAAACACCG TCTTTGACTT TTTGGAGGAG ATTGTCGCTA AGGTACCTGA TATTGGAACC GACATTAACT CAGAGGAGAG AAACGGTGGA AGGAGGAGGT GAGCATACAT ATACTCACTG TTCGTACGCA AGAGTCATCT GCGTCTCTCC CACGAGTTAT GAAGGGGTCG AGCCGACCGT AGTGTACTTT TCAAACAACT TCGCTCTTAT ATACCGCTTC TGTACTCATT ATTTGTAAGT GTAGGTGGGC TATTCACCTG CAAGTAAAAG TTTTGTTCTG CTCACCACTG TGCTTTTTCT TTTGTTTTCT TTGCATTTTT CCCTGCAGAA AGGTTTCTGA CGGAGACAAT GATGACAGTG AAGAGGAGGA TGTTGTGAAA CGGCCAAAAG CGGTAAGTTT TTTAAAATGG TTATTAGTTG TAAGTAAATT TAGCCAAAGC TGTTCACTAA TGTTGGCTGC GGTTGTCGAT TACATCATAT GTTGCTCTGC CTGCGATGTC GATCACCTAT AATATTCAAT ATACTGTTTA CCTGCAAAAA AGTGTTGAAT TGTTGGCCAA GTTACAGCAG ATGGAGCAGG AAAAGCAGGG TGCATTATTT TCGATATACT GCAAACACCT GCTTTTTGCC AATCTCTCTC TATCTGCCTC TAGAATAGAT GCCTCCGACC TTTCTAATAG CTGACAGGCA ATTTGGTTAT CCAGGTAGCT CTATTTACCC TGTCTGTATT CACCAGCTGT CTTGCGATGC GGCGCGTATA GGAAGTGAAG GCAGTCATAA AGTATGTTTG TGCATTTATC TTTCGCTGAT GTGATGGTAT TTAATTTACA ATTCAGGAAA TCCAGCCAAC GACCCCTGGT AGGGGACGCG GTAGAGGGCG GGGCAGAGGA AGAGGAAGGA ATGGAACGAG GGTCCATGTG GAGAAGTTTG AAGAGTCCGA GACTGACTTG AGCCCGCCAC CTCCGCTGGA GAGATCCGCT GAGAGGGTTA CTCTAGAGAC AATCGCTGTT AGGGCAAAAG AAGAAGATGC CCCTACATTA GAACCCGTGG CATCATCTGC GACAGGACGA CCTCAAATAA GATTTGAGTT CGATCTGAAT CTGGATTTAG ATGAAAATGG TGATGTAGCG ACTGTAGCCC ACCACAAAGA GGTCAAAGAG GAGGAAGAAG AACAAGAGAG TGAATCGGAA CAACAAAAAC CCCCTCCAAG CTGGCCACCG ACTCTCAGTG TAGATATACC ACAATTAGGG GTAGGACATT TACAAGATAG GCATACAACT ATGCATCCAG ACGAAGATGA TTATGATTGT GAAGATGATG AAGACGGTTA AACATCACTT GTCTCATTTC TTTCCCAATC TTGTGTATCT AATCTTTGCA AATTCTCTTT GTACAATTAA GAAACATGAC ACAATTAACA TGGTCCCACC TCTAGCACGT GGGTTCTT |
mRNA UTR + CDS |
| >Mp1g16880.1 GACGGACTCG ACACCTGAGG AGAAGGAGCG AGCGCGAGAG AGAAAGAGCG GAACAAGAGA AGGGAGCACG CTACGAGAGA GAGAGGAGAG AGAGGAGAGA GAGGGAGAGG GAGAGAGAGA GAGAGAGAGA GCGCGCAGAT AGAGCCAGCA ACGAGCGGTA CCAGGGTCGA CGGGGCGGGG CTTTGAAGGG CAGGAAGTGG AAGGAAAGGA AACCACGGGC AAGAAAGCCA GAGACAAGGT CGACGGGTCG ACGGGCAGGA GGAGGAGACT CAGGAAAGCA CCAGGGCAGT CGCGGAGAAA GCGTTGCTGG AGAGAACGAC CGACCGACCG AACGTCCGGA GGGGAGAAGT TGTAGCAGGT GGTCGAACGA ACGGGCCGAG ACGAGAAGAG TCGAGGTGGA CGCGTTGCTG AGACTGGATG AGGCAAGTCG GTCGAGCAGC AGCAAGCAGC ACTGATCAAG AAATCTACTT CTGATTCTGT CGAGCGCGAT TGGGGTCCGC TGGGCTGCAG ATTGTGTAGG AGGTGGTGTT TAATGGATGA CGATTGTTAG TGTCTGGCCC CGTTTTCGTC CTGAGAAAAT TAGGGAATTT ATTTTCTGTC TGGTAGTTTC GTAATTGTGG AAGCGAAAGC GCTAGAGGCC GGCGGGTGAA GGAAGATTCA AATGACTAGA GGGTAAAGAT GATGGGTCTG TAGGCCGCCT GGTCTTGTGT TACGGAGAGA CTCGAGTGAA TTTATCTCGG TCTCTGGGGT AGCAGTTCTT CTGCAATGGC GATGACAGAG GAGTTCGTGG TGTGCTCCAG GCACGCGTAG GGTACGGTAC CGAACATTGC TGTGGAAAGG AGACTGCAAG GCCTCGAGAA TGGCCTTGAG CGACAGCGTA TGTTTCGAGC AAACTGTGCG CATGCGTTAG AAAGGCGACA GGGTATGACT CGAGTGGAGT GAAGGTTTTC TTATGCCGGC CTTTACGAAC CAGGGTTGCC ACTTTGGGGA CATTAGGTTG AAGCTTTGCG GAAATTATAA GTGGAGTTTT TCCGAAACTT ACTGTGGGCT CGAAAACCAG GGTCCAACAT GAAAAAGAAA CTGGATACCC GTTTTCCTGC GGCTCGAATC AAGAAGATCA TGCAGGCGGA TGAAGAAGTC GGAAAGATAG CAATGGCGAC GCCCGTTCTG ATTTCCAAGG CTCTTGAGCT TTTTCTTCAA AATTTATGTG ACAAGACTTA TGAAATTACC CTCAGAAGGG GAGCCAAAAC CATGAGCGCC CTGCATTTGA AGCAGTGTGT ACAACAAAAC ACCGTCTTTG ACTTTTTGGA GGAGATTGTC GCTAAGGTAC CTGATATTGG AACCGACATT AACTCAGAGG AGAGAAACGG TGGAAGGAGG AGAAAGGTTT CTGACGGAGA CAATGATGAC AGTGAAGAGG AGGATGTTGT GAAACGGCCA AAAGCGGAAA TCCAGCCAAC GACCCCTGGT AGGGGACGCG GTAGAGGGCG GGGCAGAGGA AGAGGAAGGA ATGGAACGAG GGTCCATGTG GAGAAGTTTG AAGAGTCCGA GACTGACTTG AGCCCGCCAC CTCCGCTGGA GAGATCCGCT GAGAGGGTTA CTCTAGAGAC AATCGCTGTT AGGGCAAAAG AAGAAGATGC CCCTACATTA GAACCCGTGG CATCATCTGC GACAGGACGA CCTCAAATAA GATTTGAGTT CGATCTGAAT CTGGATTTAG ATGAAAATGG TGATGTAGCG ACTGTAGCCC ACCACAAAGA GGTCAAAGAG GAGGAAGAAG AACAAGAGAG TGAATCGGAA CAACAAAAAC CCCCTCCAAG CTGGCCACCG ACTCTCAGTG TAGATATACC ACAATTAGGG GTAGGACATT TACAAGATAG GCATACAACT ATGCATCCAG ACGAAGATGA TTATGATTGT GAAGATGATG AAGACGGTTA AACATCACTT GTCTCATTTC TTTCCCAATC TTGTGTATCT AATCTTTGCA AATTCTCTTT GTACAATTAA GAAACATGAC ACAATTAACA TGGTCCCACC TCTAGCACGT GGGTTCTT |
CDS |
| >Mp1g16880.1 ATGAAAAAGA AACTGGATAC CCGTTTTCCT GCGGCTCGAA TCAAGAAGAT CATGCAGGCG GATGAAGAAG TCGGAAAGAT AGCAATGGCG ACGCCCGTTC TGATTTCCAA GGCTCTTGAG CTTTTTCTTC AAAATTTATG TGACAAGACT TATGAAATTA CCCTCAGAAG GGGAGCCAAA ACCATGAGCG CCCTGCATTT GAAGCAGTGT GTACAACAAA ACACCGTCTT TGACTTTTTG GAGGAGATTG TCGCTAAGGT ACCTGATATT GGAACCGACA TTAACTCAGA GGAGAGAAAC GGTGGAAGGA GGAGAAAGGT TTCTGACGGA GACAATGATG ACAGTGAAGA GGAGGATGTT GTGAAACGGC CAAAAGCGGA AATCCAGCCA ACGACCCCTG GTAGGGGACG CGGTAGAGGG CGGGGCAGAG GAAGAGGAAG GAATGGAACG AGGGTCCATG TGGAGAAGTT TGAAGAGTCC GAGACTGACT TGAGCCCGCC ACCTCCGCTG GAGAGATCCG CTGAGAGGGT TACTCTAGAG ACAATCGCTG TTAGGGCAAA AGAAGAAGAT GCCCCTACAT TAGAACCCGT GGCATCATCT GCGACAGGAC GACCTCAAAT AAGATTTGAG TTCGATCTGA ATCTGGATTT AGATGAAAAT GGTGATGTAG CGACTGTAGC CCACCACAAA GAGGTCAAAG AGGAGGAAGA AGAACAAGAG AGTGAATCGG AACAACAAAA ACCCCCTCCA AGCTGGCCAC CGACTCTCAG TGTAGATATA CCACAATTAG GGGTAGGACA TTTACAAGAT AGGCATACAA CTATGCATCC AGACGAAGAT GATTATGATT GTGAAGATGA TGAAGACGGT TAA |
Protein |
| >Mp1g16880.1 MKKKLDTRFP AARIKKIMQA DEEVGKIAMA TPVLISKALE LFLQNLCDKT YEITLRRGAK TMSALHLKQC VQQNTVFDFL EEIVAKVPDI GTDINSEERN GGRRRKVSDG DNDDSEEEDV VKRPKAEIQP TTPGRGRGRG RGRGRGRNGT RVHVEKFEES ETDLSPPPPL ERSAERVTLE TIAVRAKEED APTLEPVASS ATGRPQIRFE FDLNLDLDEN GDVATVAHHK EVKEEEEEQE SESEQQKPPP SWPPTLSVDI PQLGVGHLQD RHTTMHPDED DYDCEDDEDG |