Mp1g17010



Description

Annotation

Database ID Description
KOG KOG0386 Chromatin remodeling complex SWI/SNF, component SWI2 and related ATPases (DNA/RNA helicase superfamily); [BK]
KOG KOG1474 Transcription initiation factor TFIID, subunit BDF1 and related bromodomain proteins; N-term missing; C-term missing; [K]
KOG KOG2341 TATA box binding protein (TBP)-associated factor, RNA polymerase II; C-term missing; [K]
KOG KOG4701 Chitinase; N-term missing; [M]
Gene3D G3DSA:3.40.50.300 -
ProSiteProfiles PS51666 QLQ domain profile.
MobiDBLite mobidb-lite consensus disorder prediction
PRINTS PR00503 Bromodomain signature
SUPERFAMILY SSF47370 Bromodomain
Pfam PF00439 Bromodomain
Coils Coil Coil
SMART SM00487 ultradead3
CDD cd18793 SF2_C_SNF
Gene3D G3DSA:1.20.920.10 Histone Acetyltransferase; Chain A
SMART SM00490 helicmild6
Pfam PF00271 Helicase conserved C-terminal domain
PANTHER PTHR10799 SNF2/RAD54 HELICASE FAMILY
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Gene3D G3DSA:3.40.50.10810 -
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
ProSiteProfiles PS50014 Bromodomain profile.
SMART SM00951 QLQ_2
Pfam PF00176 SNF2 family N-terminal domain
PANTHER PTHR10799:SF978 ATP-DEPENDENT HELICASE BRM
SMART SM00297 bromo_6
MapolyID Mapoly0001s0041 -

Nomenclature

Gene symbol Product Transcript ID Status
Mpsnf1.7 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g17010.1 chr1:17299827..17316019 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g17010.2 chr1:17299759..17316019 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.