Mp1g17170
Description
Annotation
| Database | ID | Description |
|---|---|---|
| PANTHER | PTHR13887 | GLUTATHIONE S-TRANSFERASE KAPPA |
| Gene3D | G3DSA:3.40.30.10 | Glutaredoxin |
| CDD | cd03024 | DsbA_FrnE |
| SUPERFAMILY | SSF52833 | Thioredoxin-like |
| Pfam | PF01323 | DSBA-like thioredoxin domain |
| MapolyID | Mapoly0001s0057 | - |
| GO | GO:0016491 | oxidoreductase activity |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpTHIO | programmed cell death marker | Provisional |
Associated Literature (AI-based literature mining, Beta-version)
Thionin PCD/defense marker (Mapoly0001s0057); induced during immune response and cell death.
1 core 1 peripheral
Gimenez-Ibanez, S., et al. (2019)
· Current Biology research experimental subject
Thionin PCD/defense marker (Mapoly0001s0057); induced during immune response and cell death.
Redkar, A., et al. (2022)
· New Phytologist research experimental comparator
Thionin-type cell-death/defense marker gene (Mapoly0001s0057); upregulated in thallus infected by Fusarium oxysporum, supporting M. polymorpha as a model for conserved fungal infection mechanisms.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp1g17170 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g17170.1 TACTTCTTGT TGAGATGTTC TCATTCCTTG TGAAATAATG CTGGTTTCCC CAAAAAGAGT AATCTAACAA TCGAGGATGA TACAGAATTG CAGGACTGGA GCTTCGGAAT ATACTATTCT GGAAGAGAGA TGGAGGTAAC TTCCGGAGGA TCTTCCTGAG CACAGAGTAC CGAGAATCCC GGTACGCAAA GGCAAATGAA GAATCTCCGA GCGACATGTA GAAATGATGA ATTGAGCAAC GTGTTTCGCA GATTGGTGTG TGGAGAAGTG CAGATCCCTC GATTGGTGTG AGGAGTGAAG AGCAGAGACA ATCTTACAGA GGACAAGATG GCGAAGAATC TCATCAAGAT CGACATTGTT TCGGACACCG TCTGTCCATG GTGCTTTATC GGCAAGAAGT ATCTCGAGAA AGCTATGCGT TCCTGCGAAG ACAAATTTGA TTTCGAGGTA ATTCTTCACC TGTACGCTGA ATTTGGTCAC AATTTGAATT TTCAAGTTAC GGAAAAATCA ACTAGTCCAT GTTTGCACAT TCATGTGTGA ACAAATTGGC CTGAGACAAG GCCGCGAAAG TCTTGCACAC CTTTTTATGC CCCGAAACTA TTCGCCTACA GCCATGTTTC TCAGGTCTCA CCAGTCTAGT CATCATCGCA CACTCGAATA GTCTCACTCC TCAATTTCGA TGACGCCCAT CTTCCCTCAT ACAGATCAGG AACGAGTGAG TAGATGATTC AAAAGGACCG CGCAAGTTTT GTTAAGACTC ACGTGTCCTT TTTTTTGGGG TGTAGGTCAG ATGGCATCCT TACATGCTAA ATCCCAATGC TCCTAAGGAG GGCGTGAATA AACTGGAGCA CTACAAGCAG AAATTTGGAA GTACGCGTGT GCAGTCTATG GTAGAGCGTG TGGGTCAGGT AAGCGCTGAA TCTTTTTCAA GTCAGCTAAT TATAGGGAGG TACAGATTAA TATCGTCCCC GACTGAGTAT ATGCGTTGAT TTCTCTTGCA GGTGTTTGCC GGACTGGGTG TGCAGTATTC CATGGGTGGC AAAACGTAAG CTCTTTGCGT TTGTCTTTGC TTCTCCTCGC TCGCGAAGCA CCTCAAACAT GATGGCATGT TGTTCCTTTC ATTTTTTGCT GATAAAAATA TATATCTGAA CCTCTCCATC AATTTTCTGA TTGCAAGGTG AGGAGTAAAA GCACTCAGTT TACCAAGGAT TGTGATAAGA GTGTAGATTG AGATGAGCTA TTTCTGACCA ATATAGAGAG TTTCAAAATG CTCAAAGATA TCATCTGGAG TGCAGCACAG TCCATGGAGA AGTGACTAAA GCGGCAGGAT TCATATTTAG TTGTCATTCA GTCTCTGAGC TGTTATGAAT AATGTAGATC ACTGGGCTGG AAACAGTTTT CTGAACTTCG CGTCTTTGAG GAGTGTTGAT AAGTGACTGT TGTCTTTGTG CAGTGGCAAT ACTTTGGATA GCCACCGCCT GATTGCTCTA GCAGGTCGTC AAGGTCTTGA GAAACAGAAC AATCTTGTTG AGGAGCTCTT TTTGAACTAC TTCGCCGAAG AGAAGCACCT TGGTGACAGG TAAGTCCTTA CATTGTTGCT GAACTTGGGC TCCACTCCCT ACATTCAATT TTAGTTCGTG TTGGTGAAGT AGTACTGGTA TGCTTTGGAG GCTGTGAGGA AGCGGAAGTC AGTTTGTTAG TATATGTATG TGAAGAAGCT GTGATGTTAC ACTTTTTATT GGAATGCTTT GTGACTCTGC AAGATCATCA GTTATGAGTA GGCGACAATG ACGAACTACA ACTATTCTCT GAAGTTTGTA TATTACCTCG AAATAATGAT GATTTGTGAG TTTGATAATG TGGATGAATG AAGCAATCAG TTTCGATCCT TAGCAGCCGT TGACGGACAG CCGTTGTTAT ACCCGTTGTC CAGGCAAGTG CTTCTGAATG CCGCCCACAA GGTGGGAATA GAGGGCGCCG AACAACTGCT TGACGATCCA AATGCGGGAG TGAAGGAGGT GTGTGAATAC CAGCCTTCAC CTAAGATGTT CATGACATTA TGGTCAGTTC ATGCTTGCTT CGGCTTGACT GTATAGTACT AATCCGAGGT ATTTGTTATC AAGGGGTCTC TATGACCTTG CTCCCACTGA AAGCTTAGAT TCACGGAGTG TACTCTCTGG GATCTGCCTT TTTTCTAGTG ATGTTACGAC AGATGTTAGA TAGTCGAACG ACGTTGTTTT GTTTAAGCTT TCAGCGTGGG TATGGCAGAT TCACGAGGAG ATTCAGAAGT ACGCAAGAGG AGTAAATGGT GTGCCGCATT TTACGGTCAG AAAACTGCAC TATTCTGGAC CCTTAATGGA CACCTGTGTT TAAGCGATAC GAGTACATTA TAACAGCAGT TTTGTAATCG GTTGTCTTCG TATAGGATCG AATATAGAAA CACAGAGAGC TATAGCTTCT GCAATCTAGC TAAAGATTGG AGGCATTTGA GTAAAGACAG TTTGGGGTAA AGGCCCTAAA GTAGAGGTTG AAGTCCATAC ATCTTTCTTC TTTGTGGATC TTTCACCTTT CTTACTTTCT TTCCTATGTT GATGTCTATC CCTTCTTCCT TTTAGTCTCG ACTAAGGATT TTGCTTTGAA GCCATTCACT CTGTGACCAA CATGTTGGAT AATCGTTGCA GATTGGTGAC CGCATCCAGC TTTCTGGTGC TCAACCTCCG CAGTCGTTTG TGGAAGCTTT CGAAGTGGCC GCAAAACCCC AATGAAGACC TGAAAACGGA TCGTAGTATA CAAGGTGAGA TGGCGTGTCT ATCTTCGTCT TGCAAATGTG GGCTTGCTTT ATTGTGGGAA ACCGATCATT TAGTGCTTTT GCCAATGGAA CTCCATGGCC TCTTGCTGCA GGTTGTAATA GTTTTTCATC GCTGTGAAGA AAGGGAGCCT CGAATAAAAA GGCTCGATTG GTGCACCACT GTACATCAGA ATAAAAAGAT CGTGAACGAA AACTACTTTT TCTTTGTGGA AATAGTAAGT GCTAAGCTTC GCTGATCAGA TGTTAGCCGT CGACAACTTT GTCAGCACGT ACATGTTGAT ATCTAAACTA GGATCTTTAC TTTTCAATCT GTTACTGGCT GAAAGAGATA CCGGGAAATG ATTGAGCTTG TCAGTTTTTT CAAGTGTTTT AGGCTTTCCT ACAGCTGATC GATACGACTT GTGCTCTCGC AATTGATGTG GAAAGAATTA AATGAGGTTC CGCTTAATTG GATGCGGTCA GAGATACTGA CTGTGCAACA TGTCGAGTTG TTCTGTTGTA TATATGCTAT ACACGATACG C |
mRNA UTR + CDS |
| >Mp1g17170.1 TACTTCTTGT TGAGATGTTC TCATTCCTTG TGAAATAATG CTGGTTTCCC CAAAAAGAGT AATCTAACAA TCGAGGATGA TACAGAATTG CAGGACTGGA GCTTCGGAAT ATACTATTCT GGAAGAGAGA TGGAGGTAAC TTCCGGAGGA TCTTCCTGAG CACAGAGTAC CGAGAATCCC GGTACGCAAA GGCAAATGAA GAATCTCCGA GCGACATGTA GAAATGATGA ATTGAGCAAC GTGTTTCGCA GATTGGTGTG TGGAGAAGTG CAGATCCCTC GATTGGTGTG AGGAGTGAAG AGCAGAGACA ATCTTACAGA GGACAAGATG GCGAAGAATC TCATCAAGAT CGACATTGTT TCGGACACCG TCTGTCCATG GTGCTTTATC GGCAAGAAGT ATCTCGAGAA AGCTATGCGT TCCTGCGAAG ACAAATTTGA TTTCGAGGTC AGATGGCATC CTTACATGCT AAATCCCAAT GCTCCTAAGG AGGGCGTGAA TAAACTGGAG CACTACAAGC AGAAATTTGG AAGTACGCGT GTGCAGTCTA TGGTAGAGCG TGTGGGTCAG GTGTTTGCCG GACTGGGTGT GCAGTATTCC ATGGGTGGCA AAACTGGCAA TACTTTGGAT AGCCACCGCC TGATTGCTCT AGCAGGTCGT CAAGGTCTTG AGAAACAGAA CAATCTTGTT GAGGAGCTCT TTTTGAACTA CTTCGCCGAA GAGAAGCACC TTGGTGACAG GCAAGTGCTT CTGAATGCCG CCCACAAGGT GGGAATAGAG GGCGCCGAAC AACTGCTTGA CGATCCAAAT GCGGGAGTGA AGGAGATTCA CGAGGAGATT CAGAAGTACG CAAGAGGAGT AAATGGTGTG CCGCATTTTA CGATTGGTGA CCGCATCCAG CTTTCTGGTG CTCAACCTCC GCAGTCGTTT GTGGAAGCTT TCGAAGTGGC CGCAAAACCC CAATGAAGAC CTGAAAACGG ATCGTAGTAT ACAAGGTTGT AATAGTTTTT CATCGCTGTG AAGAAAGGGA GCCTCGAATA AAAAGGCTCG ATTGGTGCAC CACTGTACAT CAGAATAAAA AGATCGTGAA CGAAAACTAC TTTTTCTTTG TGGAAATAGT AAGTGCTAAG CTTCGCTGAT CAGATGTTAG CCGTCGACAA CTTTGTCAGC ACGTACATGT TGATATCTAA ACTAGGATCT TTACTTTTCA ATCTGTTACT GGCTGAAAGA GATACCGGGA AATGATTGAG CTTGTCAGTT TTTTCAAGTG TTTTAGGCTT TCCTACAGCT GATCGATACG ACTTGTGCTC TCGCAATTGA TGTGGAAAGA ATTAAATGAG GTTCCGCTTA ATTGGATGCG GTCAGAGATA CTGACTGTGC AACATGTCGA GTTGTTCTGT TGTATATATG CTATACACGA TACGC |
CDS |
| >Mp1g17170.1 ATGGCGAAGA ATCTCATCAA GATCGACATT GTTTCGGACA CCGTCTGTCC ATGGTGCTTT ATCGGCAAGA AGTATCTCGA GAAAGCTATG CGTTCCTGCG AAGACAAATT TGATTTCGAG GTCAGATGGC ATCCTTACAT GCTAAATCCC AATGCTCCTA AGGAGGGCGT GAATAAACTG GAGCACTACA AGCAGAAATT TGGAAGTACG CGTGTGCAGT CTATGGTAGA GCGTGTGGGT CAGGTGTTTG CCGGACTGGG TGTGCAGTAT TCCATGGGTG GCAAAACTGG CAATACTTTG GATAGCCACC GCCTGATTGC TCTAGCAGGT CGTCAAGGTC TTGAGAAACA GAACAATCTT GTTGAGGAGC TCTTTTTGAA CTACTTCGCC GAAGAGAAGC ACCTTGGTGA CAGGCAAGTG CTTCTGAATG CCGCCCACAA GGTGGGAATA GAGGGCGCCG AACAACTGCT TGACGATCCA AATGCGGGAG TGAAGGAGAT TCACGAGGAG ATTCAGAAGT ACGCAAGAGG AGTAAATGGT GTGCCGCATT TTACGATTGG TGACCGCATC CAGCTTTCTG GTGCTCAACC TCCGCAGTCG TTTGTGGAAG CTTTCGAAGT GGCCGCAAAA CCCCAATGA |
Protein |
| >Mp1g17170.1 MAKNLIKIDI VSDTVCPWCF IGKKYLEKAM RSCEDKFDFE VRWHPYMLNP NAPKEGVNKL EHYKQKFGST RVQSMVERVG QVFAGLGVQY SMGGKTGNTL DSHRLIALAG RQGLEKQNNL VEELFLNYFA EEKHLGDRQV LLNAAHKVGI EGAEQLLDDP NAGVKEIHEE IQKYARGVNG VPHFTIGDRI QLSGAQPPQS FVEAFEVAAK PQ |