Mp1g17210



Description

Annotation

Database ID Description
KEGG K09422 transcription factor MYB, plant
KOG KOG0048 Transcription factor, Myb superfamily; [K]
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
PANTHER PTHR45614 MYB PROTEIN-RELATED
Gene3D G3DSA:1.10.10.60 -
CDD cd00167 SANT
SMART SM00717 sant
PANTHER PTHR45614:SF88 TRANSCRIPTION FACTOR MYB119-RELATED
SUPERFAMILY SSF46689 Homeodomain-like
Pfam PF13921 Myb-like DNA-binding domain
MapolyID Mapoly0001s0061 -

Nomenclature

Gene symbol Product Transcript ID Status
MpR2R3-MYB1 transcription factor, MYB Published
MpFGMYB FEMALE GAMETOPHYTE-SPECIFIC MYB Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g17210.1 chr1:17534569..17541679 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g17210.2 chr1:17534423..17541679 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g17210.3 chr1:17534569..17540353 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g17210.4 chr1:17534569..17540353 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.