Mp1g17340



Description

Annotation

Database ID Description
Pfam PF03016 Exostosin family
PANTHER PTHR11062 EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED
KEGG K20888 xyloglucan galactosyltransferase MUR3 [EC:2.4.1.-]
KOG KOG1021 Acetylglucosaminyltransferase EXT1/exostosin 1; [GMW]
MapolyID Mapoly0001s0074 -
GO GO:0016757 glycosyltransferase activity
GO GO:0006486 protein glycosylation

Nomenclature

Gene symbol Product Transcript ID Status
MpGT47.3 Cell wall related protein Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp1g17340.1 chr1:18140336..18145652 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g17340 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g17340 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.