Mp1g17590



Description

Annotation

Database ID Description
SUPERFAMILY SSF51905 FAD/NAD(P)-binding domain
Gene3D G3DSA:3.50.50.60 -
Gene3D G3DSA:3.30.390.30 -
Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase
Pfam PF21791 Monodehydroascorbate reductase 3-like, C-terminal domain
PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature
SUPERFAMILY SSF55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature
PANTHER PTHR43557 APOPTOSIS-INDUCING FACTOR 1
KEGG K08232 monodehydroascorbate reductase (NADH) [EC:1.6.5.4]
KOG KOG1336 Monodehydroascorbate/ferredoxin reductase; [R]
MapolyID Mapoly0001s0099 -
GO GO:0005737 cytoplasm
GO GO:0050660 flavin adenine dinucleotide binding
GO GO:0016651 oxidoreductase activity, acting on NAD(P)H
GO GO:0016491 oxidoreductase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpMDHAR1 monodehydroascorbate reductase Published

Associated Literature (AI-based literature mining, Beta-version)

monodehydroascorbate reductase (from nomenclature)

0 core 1 peripheral

Aggarwal, B., et al. (2024) · RNA Biology  research citation comparator
Cited as an Arabidopsis miR169 target example for cross-species comparison of cleavage-site location.

Transcript models

Transcript ID Location Sequences Extract region
Mp1g17590.1 chr1:18396509..18401280 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g17590 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g17590 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.