Mp1g18880



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
NCBIfam NF037982 Nramp family divalent metal transporter
Pfam PF01566 Natural resistance-associated macrophage protein-like
Coils Coil Coil
PRINTS PR00447 Natural resistance-associated macrophage protein signature
PANTHER PTHR11706 SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER
NCBIfam TIGR01197 metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family
PIRSF PIRSF037378 EIN2
KOG KOG1291 Mn2+ and Fe2+ transporters of the NRAMP family; [P]
MapolyID Mapoly0001s0226 -
GO GO:0030001 metal ion transport
GO GO:0046873 metal ion transmembrane transporter activity
GO GO:0015086 cadmium ion transmembrane transporter activity
GO GO:0005384 manganese ion transmembrane transporter activity
GO GO:0016020 membrane
GO GO:0009873 ethylene-activated signaling pathway

Nomenclature

Gene symbol Product Transcript ID Status
MpEIN2 Ethylene related protein, potential role in ethylene signal transduction Published

Associated Literature (AI-based literature mining, Beta-version)

Ethylene related protein, potential role in ethylene signal transduction; Genome paper Mapoly0001s0226 (from nomenclature)

0 core 1 peripheral

Li, D., et al. (2020a) · Nature Plants  research experimental comparator
EIN2; ethylene-signaling component.

Transcript models

Transcript ID Location Sequences Extract region
Mp1g18880.1 chr1:19848366..19857534 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g18880 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g18880 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.