Mp1g18960
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:1.20.5.110 | - |
| SUPERFAMILY | SSF58038 | SNARE fusion complex |
| Coils | Coil | Coil |
| Pfam | PF12352 | Snare region anchored in the vesicle membrane C-terminus |
| CDD | cd15863 | SNARE_GS27 |
| PIRSF | PIRSF028865 | Membrin-2 |
| PANTHER | PTHR21230 | VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED |
| KEGG | K08496 | golgi SNAP receptor complex member 2 |
| KOG | KOG3251 | Golgi SNAP receptor complex member; [U] |
| MapolyID | Mapoly0001s0234 | - |
| GO | GO:0000149 | SNARE binding |
| GO | GO:0016192 | vesicle-mediated transport |
| GO | GO:0031902 | late endosome membrane |
| GO | GO:0006906 | vesicle fusion |
| GO | GO:0005794 | Golgi apparatus |
| GO | GO:0005789 | endoplasmic reticulum membrane |
| GO | GO:0031201 | SNARE complex |
| GO | GO:0012507 | ER to Golgi transport vesicle membrane |
| GO | GO:0005484 | SNAP receptor activity |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpMEMB1 | Ortholog of Arabidopsis MEMB1 genes | Published |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp1g18960 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g18960.1 GGTTTAGTGG GAAACCTTTG AACGTCGTAT GGCGAGATTT GGTGAATGAT TAGAAGGAAA AGCTCGGAAG AAAGAAGGGA ACCGTCGGAC TGTCACAACG TGCAGGACAA CATCGTCGTC GGCCGAGGCG GAGTGCGACC CAAGGCACGC GCGGGTCCGG AGAGAATTCG GAAGCCGGTG GCCAGAAGGA GGAACGAGTG CGTCGACGCT GCGATGACGT AAGTGGGGCA ATGGCAGATG TGGCGATTTC GCGACGCAAT GCCAGACTCG AGCACCAAGA ATGTTTGCGG CTGAATTGCG GGACCGATCG GTCGAGCGAT GGGCTTCGTG GCCATGGTCG GTGGCGCAGA GAGACTGAGT TCTTGTGGCT GGGTTTTGTG CAGCTCCGGC GTCAATTTCG TGGATTAGCG ACTCGAGTAG AGGCCGAATT GGGCGTCGAT CGAATTGAGC CCGAGGTGTG ATCGAGGGCC GGAATCGAGG ATGGCGATGA TGGGGAGCGG GGCCGCCCCC GCGACTCTGT CGGACGTGTA CCAGCAAGCG CGGCACGCGC TGCTCAGGGT GCGCGACGGC CTCGAGCGGC TGGAGCGCCT GGAAACGGCG GGCGGCGCAT CGGGCTCGGA TCTGGCGCAG GGCGTGCAGC GCGATCTGGC GCAGCTGCAG CAGAGCAGCG TGGAGATGGA GCGCCTGTGG CGCCAGCAGA TGCCCAAGGC GCAGAGAGAT CTGTGGAAAC GGTACGCGGC CTTGTCTCTC CTCCTCTGCA AGCTTCGATG GTCGGCTGCT TCGCTTGTCT CACTTTGCCC CCTCCTCGCC GCTCCCATCG CTGCTGCTGC TGCTGCTGCT GCTGGCAGGA TGTGGATTCT AAAGCCGTGA CCTCGGATGC TGGTGGGTGT GGGTGAATCG GCAGCAAGGT GGAGCAAATT GCCGAGGAGT CGGATTCGTT GAAGCTCGGG CTGGACAAGT ACCTGGGGCG GCAGCATCGC CGGCATGTCG AAGCGCAGGA GAGGGCTGAG CTTTTCCGGA GGACGGTTCG TATTCGAGCT GTGAGCCTGT TGCATTCTTG CTGTCAAAGA TCAGTCACAT GTATTACCTT CTTCGGAAGG GTAGGGCAAC CTCAGGCCCC GACTGTGCCG ACATCTTATG ACTGAAGCCG ATGTATGTTA GAAAGTGAGA TTGTATGTTC TTTCGTTACC CTCGGGCAAT ATTCCTGCGT GCTTTTTTGG GTCGAAGTCT TCGTGGGGCT TGCTCGCCCG GTAGCTGTTG TGCCCAATTT CTGTGCCTGC TCGCACGACC TAAATTACTT GTTCAGGATA TGGTCTGATA TTCACCTCCG GGTATGTGGA TGTAATTTGA ACCGATTGAT GTGCACAGAA TGGCGACTCT GCAACTATTT TGCAAGTTCT GGACGAAGAG GCTCAAACGA TACAGTCCGT TCAGAGATCG TCCAATATGC TCGACGAGGC ATATGCTACC GGGGCAACCG TGCTGGCCAA GTATTCCGAG CAGCGAGAGA GATTGAAGGT ATGTCGAACT CAATACTCCT CATGGCCGGC TTGTCACCAG CCTTGAAGTT TTACTTTCTC ACCACGACGG GCGTCCCAGA CTGGCTTCAC AGAAAACGCT GTGAACATGA AGTTTTCCTT ACGGTGTGCA ATTTTTAGAT TCAAATGTTT CAAGAAACTC TGCGCCTGTG ACTCGAGTAA GACGAAGGAC CTCTTCGTGG GTCTCGTCAC CGCACGTTGA ACAGAGCTGG ATGTAGTGAT TTTGTTGCCC GGGCTAAGCT GTTTTGTTAC GTGTCCGAGT TATCAATTCA TCACTACCTT CACGCGTTTG TTCATTCAGT TCCAATTCTG TGAGCTGTCA GCGTTTAGTC GTCGTGTTCT GATGTCGTGC GTGTGTCCAC TTGCAGTCGG CACAACGGAA GGCGCTTGAT ATCTTGAACA CCGTGGGACT GTCGAACTCC GTGCTGAGAG TGATCGAACG GCGACACCGA GTGGACAAGT GGATATCGTA TGTCGGCATG TTCGTTACTG TGGTGATCGT GATATCGGTC TGGAGATGGG CCCGTGGATA GTGACCGTGC AGACCACAAA TAACGCTGCC ATTCTTTAGA GTAATGCCCT ACTGGCCAAT CGTTCGTGCA AGCAGCACGC CAACGCCCGC AAACGCAGAT GAATGATGTA TTGTACAGCT GAAAATGACT GCGAGATGGT GAGAAGACGA AGAGACTTTG TACACCTTTC TGGTCTGATC ACATTTCTCG AGTCATGCTT TTTTCTCCCT TCTTGTATCT TCTTCTTGTC CTCTCGTCCC TCTCCAGGCC AACCACCATC CATGGAAGCG CCTGCCTGGT GCCTGGTCTG CTCTGTCGGA GGACACACGG TCGAGCCTGA ACGGGGTTGC TGGTTGCTCA TCGGGGCGAC GAGTCACTTG GCGGTGTGCT GAGATGACAC GAGACGACAC GAGATGGTTG TGCTTGGCGA GAAACACGCA CAGGACATCC ACTCGAGTAC GGGCCGAAGC TTTTCCAGCA GAGAATTGGA GCCCCTGCCT CCAAGACCGC ACTTGGCGCA CTTGGTCCTT GGAAGAAGCT CCTTCTGTCG CACATATTCG CTCGGCCAGA AGCAGTTCGG AAAATCTGAA CTTCCCTGTC TTGAATCGGA GAAGTTCGAG AGGAAAGAGA GTTAGATGCT TTATCTTCAC ATTGCAGCTT AGAGCATCTG TCAGTGAGAA GGGGAGACGA AAAGACCAGG TCGAAAATTT CCAGAAATTT TGAGCGTTCG AGTCGTTTCG AGTTGTCGTC GGACATGATC ATTGTTGCAA GTTGAGATGG AAACTGAGTC ATCGAAATGA TCATGTGTTA CCTCTCAAAT CAAGTACTCG CTCTTGAAAA CAGGATGATG TTACAACGCC ACTGTAAAAA AAGCAGTAGG ATAATTTCCG TCCTGAATAG AAATTTGAAA GAATGACATT TTAGAACTCC ATACAAGCTA TTAAGTCACC CGTGACTTTT GCTGGAAATG GAGTAGTAGA ATTCAAGATA AATCTAGTGG ACTCTTGTCT CTTTCCGTTT GTTCGGGAGT ACAAAATGAT GAGTTTTTTT ACGAGTTGGT AGTTATCCGC GAAACCATGG AGTGAATTTT CTTCCAAGTT TGTAAAGTT |
mRNA UTR + CDS |
| >Mp1g18960.1 GGTTTAGTGG GAAACCTTTG AACGTCGTAT GGCGAGATTT GGTGAATGAT TAGAAGGAAA AGCTCGGAAG AAAGAAGGGA ACCGTCGGAC TGTCACAACG TGCAGGACAA CATCGTCGTC GGCCGAGGCG GAGTGCGACC CAAGGCACGC GCGGGTCCGG AGAGAATTCG GAAGCCGGTG GCCAGAAGGA GGAACGAGTG CGTCGACGCT GCGATGACGT AAGTGGGGCA ATGGCAGATG TGGCGATTTC GCGACGCAAT GCCAGACTCG AGCACCAAGA ATGTTTGCGG CTGAATTGCG GGACCGATCG GTCGAGCGAT GGGCTTCGTG GCCATGGTCG GTGGCGCAGA GAGACTGAGT TCTTGTGGCT GGGTTTTGTG CAGCTCCGGC GTCAATTTCG TGGATTAGCG ACTCGAGTAG AGGCCGAATT GGGCGTCGAT CGAATTGAGC CCGAGGTGTG ATCGAGGGCC GGAATCGAGG ATGGCGATGA TGGGGAGCGG GGCCGCCCCC GCGACTCTGT CGGACGTGTA CCAGCAAGCG CGGCACGCGC TGCTCAGGGT GCGCGACGGC CTCGAGCGGC TGGAGCGCCT GGAAACGGCG GGCGGCGCAT CGGGCTCGGA TCTGGCGCAG GGCGTGCAGC GCGATCTGGC GCAGCTGCAG CAGAGCAGCG TGGAGATGGA GCGCCTGTGG CGCCAGCAGA TGCCCAAGGC GCAGAGAGAT CTGTGGAAAC GCAAGGTGGA GCAAATTGCC GAGGAGTCGG ATTCGTTGAA GCTCGGGCTG GACAAGTACC TGGGGCGGCA GCATCGCCGG CATGTCGAAG CGCAGGAGAG GGCTGAGCTT TTCCGGAGGA CGAATGGCGA CTCTGCAACT ATTTTGCAAG TTCTGGACGA AGAGGCTCAA ACGATACAGT CCGTTCAGAG ATCGTCCAAT ATGCTCGACG AGGCATATGC TACCGGGGCA ACCGTGCTGG CCAAGTATTC CGAGCAGCGA GAGAGATTGA AGTCGGCACA ACGGAAGGCG CTTGATATCT TGAACACCGT GGGACTGTCG AACTCCGTGC TGAGAGTGAT CGAACGGCGA CACCGAGTGG ACAAGTGGAT ATCGTATGTC GGCATGTTCG TTACTGTGGT GATCGTGATA TCGGTCTGGA GATGGGCCCG TGGATAGTGA CCGTGCAGAC CACAAATAAC GCTGCCATTC TTTAGAGTAA TGCCCTACTG GCCAATCGTT CGTGCAAGCA GCACGCCAAC GCCCGCAAAC GCAGATGAAT GATGTATTGT ACAGCTGAAA ATGACTGCGA GATGGTGAGA AGACGAAGAG ACTTTGTACA CCTTTCTGGT CTGATCACAT TTCTCGAGTC ATGCTTTTTT CTCCCTTCTT GTATCTTCTT CTTGTCCTCT CGTCCCTCTC CAGGCCAACC ACCATCCATG GAAGCGCCTG CCTGGTGCCT GGTCTGCTCT GTCGGAGGAC ACACGGTCGA GCCTGAACGG GGTTGCTGGT TGCTCATCGG GGCGACGAGT CACTTGGCGG TGTGCTGAGA TGACACGAGA CGACACGAGA TGGTTGTGCT TGGCGAGAAA CACGCACAGG ACATCCACTC GAGTACGGGC CGAAGCTTTT CCAGCAGAGA ATTGGAGCCC CTGCCTCCAA GACCGCACTT GGCGCACTTG GTCCTTGGAA GAAGCTCCTT CTGTCGCACA TATTCGCTCG GCCAGAAGCA GTTCGGAAAA TCTGAACTTC CCTGTCTTGA ATCGGAGAAG TTCGAGAGGA AAGAGAGTTA GATGCTTTAT CTTCACATTG CAGCTTAGAG CATCTGTCAG TGAGAAGGGG AGACGAAAAG ACCAGGTCGA AAATTTCCAG AAATTTTGAG CGTTCGAGTC GTTTCGAGTT GTCGTCGGAC ATGATCATTG TTGCAAGTTG AGATGGAAAC TGAGTCATCG AAATGATCAT GTGTTACCTC TCAAATCAAG TACTCGCTCT TGAAAACAGG ATGATGTTAC AACGCCACTG TAAAAAAAGC AGTAGGATAA TTTCCGTCCT GAATAGAAAT TTGAAAGAAT GACATTTTAG AACTCCATAC AAGCTATTAA GTCACCCGTG ACTTTTGCTG GAAATGGAGT AGTAGAATTC AAGATAAATC TAGTGGACTC TTGTCTCTTT CCGTTTGTTC GGGAGTACAA AATGATGAGT TTTTTTACGA GTTGGTAGTT ATCCGCGAAA CCATGGAGTG AATTTTCTTC CAAGTTTGTA AAGTT |
CDS |
| >Mp1g18960.1 ATGGCGATGA TGGGGAGCGG GGCCGCCCCC GCGACTCTGT CGGACGTGTA CCAGCAAGCG CGGCACGCGC TGCTCAGGGT GCGCGACGGC CTCGAGCGGC TGGAGCGCCT GGAAACGGCG GGCGGCGCAT CGGGCTCGGA TCTGGCGCAG GGCGTGCAGC GCGATCTGGC GCAGCTGCAG CAGAGCAGCG TGGAGATGGA GCGCCTGTGG CGCCAGCAGA TGCCCAAGGC GCAGAGAGAT CTGTGGAAAC GCAAGGTGGA GCAAATTGCC GAGGAGTCGG ATTCGTTGAA GCTCGGGCTG GACAAGTACC TGGGGCGGCA GCATCGCCGG CATGTCGAAG CGCAGGAGAG GGCTGAGCTT TTCCGGAGGA CGAATGGCGA CTCTGCAACT ATTTTGCAAG TTCTGGACGA AGAGGCTCAA ACGATACAGT CCGTTCAGAG ATCGTCCAAT ATGCTCGACG AGGCATATGC TACCGGGGCA ACCGTGCTGG CCAAGTATTC CGAGCAGCGA GAGAGATTGA AGTCGGCACA ACGGAAGGCG CTTGATATCT TGAACACCGT GGGACTGTCG AACTCCGTGC TGAGAGTGAT CGAACGGCGA CACCGAGTGG ACAAGTGGAT ATCGTATGTC GGCATGTTCG TTACTGTGGT GATCGTGATA TCGGTCTGGA GATGGGCCCG TGGATAG |
Protein |
| >Mp1g18960.1 MAMMGSGAAP ATLSDVYQQA RHALLRVRDG LERLERLETA GGASGSDLAQ GVQRDLAQLQ QSSVEMERLW RQQMPKAQRD LWKRKVEQIA EESDSLKLGL DKYLGRQHRR HVEAQERAEL FRRTNGDSAT ILQVLDEEAQ TIQSVQRSSN MLDEAYATGA TVLAKYSEQR ERLKSAQRKA LDILNTVGLS NSVLRVIERR HRVDKWISYV GMFVTVVIVI SVWRWARG |