Mp1g19520



Description

Annotation

Database ID Description
Gene3D G3DSA:3.10.20.90 -
Gene3D G3DSA:1.10.8.10 -
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50033 UBX domain profile.
CDD cd01767 UBX
Coils Coil Coil
Gene3D G3DSA:3.40.30.10 Glutaredoxin
SUPERFAMILY SSF52833 Thioredoxin-like
PANTHER PTHR23322 FAS-ASSOCIATED PROTEIN
CDD cd14353 UBA_FAF
Pfam PF21021 Fas-associated factor 1
SUPERFAMILY SSF54236 Ubiquitin-like
Pfam PF14555 UBA-like domain
SMART SM00594 45neu3
Pfam PF00789 UBX domain
SMART SM00166 ubx_3
CDD cd02958 UAS
KEGG K18726 FAS-associated factor 2
KOG KOG1363 Predicted regulator of the ubiquitin pathway (contains UAS and UBX domains); N-term missing; [T]
MapolyID Mapoly0001s0291 -
GO GO:0005783 endoplasmic reticulum
GO GO:0030433 obsolete ubiquitin-dependent ERAD pathway
GO GO:0043130 ubiquitin binding
GO GO:0005515 protein binding

Nomenclature

Gene symbol Product Transcript ID Status
MpPUX lipid droplets associated protein Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp1g19520.1 chr1:20468308..20472489 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g19520 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g19520 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

MarpolBase / Genome Informatics Lab. NIG.