Mp1g20110



Description

Annotation

Database ID Description
KOG KOG1343 Histone deacetylase complex, catalytic component HDA1; N-term missing; [B]
KOG KOG4364 Chromatin assembly factor-I; N-term missing; C-term missing; [B]
Gene3D G3DSA:3.40.800.20 -
SUPERFAMILY SSF52768 Arginase/deacetylase
MobiDBLite mobidb-lite consensus disorder prediction
PRINTS PR01270 Histone deacetylase superfamily signature
PANTHER PTHR45634:SF11 HISTONE DEACETYLASE-RELATED
ProSitePatterns PS01358 Zinc finger RanBP2-type signature.
PANTHER PTHR45634 HISTONE DEACETYLASE
Pfam PF00850 Histone deacetylase domain
MapolyID Mapoly0001s0348 -

Nomenclature

Gene symbol Product Transcript ID Status
MpHDAC3 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g20110.1 chr1:20567788..20583745 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g20110.2 chr1:20567788..20583745 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g20110.3 chr1:20567788..20583745 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g20110.4 chr1:20567788..20583745 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.