Mp1g20130



Description

Annotation

Database ID Description
SUPERFAMILY SSF75005 Arabinanase/levansucrase/invertase
Gene3D G3DSA:2.115.10.20 Glycosyl hydrolase domain; family 43
PANTHER PTHR48261 ACETYLGLUCOSAMINYLTRANSFERASE
SUPERFAMILY SSF53448 Nucleotide-diphospho-sugar transferases
FunFam G3DSA:2.115.10.20:FF:000004 Glucosamine inositolphosphorylceramide transferase 1
Pfam PF09258 Glycosyl transferase family 64 domain
Gene3D G3DSA:3.90.550.10 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A
KOG KOG1022 Acetylglucosaminyltransferase EXT2/exostosin 2; [GMW]
MapolyID Mapoly0001s0350 -
GO GO:0016757 glycosyltransferase activity
GO GO:0006486 protein glycosylation
GO GO:0016020 membrane

Nomenclature

Gene symbol Product Transcript ID Status
MpGT64.1 Cell wall related protein Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp1g20130.1 chr1:21114769..21121324 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g20130 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g20130 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.