Mp1g20540



Description

Annotation

Database ID Description
ProSitePatterns PS00592 Glycosyl hydrolases family 9 (GH9) active site signature 2.
Pfam PF09478 Carbohydrate binding domain CBM49
FunFam G3DSA:1.50.10.10:FF:000020 Endoglucanase
Pfam PF00759 Glycosyl hydrolase family 9
SUPERFAMILY SSF48208 Six-hairpin glycosidases
PANTHER PTHR22298 ENDO-1,4-BETA-GLUCANASE
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM01063 CBM49_2
Gene3D G3DSA:1.50.10.10 -
KEGG K01179 endoglucanase [EC:3.2.1.4]
MapolyID Mapoly0001s0390 -
GO GO:0005975 carbohydrate metabolic process
GO GO:0030246 carbohydrate binding
GO GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds

Nomenclature

Gene symbol Product Transcript ID Status
MpGH91 Cell wall related protein Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp1g20540.1 chr1:21567791..21572634 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g20540.2 chr1:21567791..21576496 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g20540 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g20540 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.