Mp1g20870
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:2.60.120.200 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases |
| FunFam | G3DSA:2.60.120.200:FF:000025 | Xyloglucan endotransglucosylase/hydrolase |
| Pfam | PF00722 | Glycosyl hydrolases family 16 |
| CDD | cd02176 | GH16_XET |
| Pfam | PF06955 | Xyloglucan endo-transglycosylase (XET) C-terminus |
| ProSiteProfiles | PS51762 | Glycosyl hydrolases family 16 (GH16) domain profile. |
| PANTHER | PTHR31062 | XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED |
| KEGG | K08235 | xyloglucan:xyloglucosyl transferase [EC:2.4.1.207] |
| MapolyID | Mapoly0001s0422 | - |
| GO | GO:0048046 | apoplast |
| GO | GO:0010411 | xyloglucan metabolic process |
| GO | GO:0044042 | glucan metabolic process |
| GO | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO | GO:0005975 | carbohydrate metabolic process |
| GO | GO:0042546 | cell wall biogenesis |
| GO | GO:0016762 | xyloglucan:xyloglucosyl transferase activity |
| GO | GO:0005618 | cell wall |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpGH16.2 | Cell wall related protein | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp1g20870 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g20870.1 GGAGACACAA CTGCGACACA TCTGCGATTA CTAGAATGTC CTGCGCGTCA GCTCGAGTCC AGATTCCGCT TAATCGTCCT CTGGCATAGG AGATCGACGA CTCGGAGCAC TTGTCCGCGC GCGTGCATCG ATGTAAGAGT TCAGATTTTG TCTCACGTCT GGATTGGCAT TCGGGAACGC AGTCATTGTG GCGTGTACGC CGAAGCGGCG CTGCCGGAAA CGATCGATGG GTCGAATGGA GTCGCAGTCA GATCGTACGT AAAGAACATC AGCGCGGTCT TCGCATTCAA GTCCCATTAT CCCTCGCTGG TTGGCCCTGT CCAAAACTAC ACGGCACCGG CTAGCGGATC TCAGACCGGG GGCCGGCAGT TCCTCCTGTC CCGACTCGAA CATTTCTCCT TCTGCATTAC GCTATCTCTA TCGGGTACAT TACAGGTGTA TCCGGTAGGA CGTTCTGCAC TACGGGTAGC GATTATTGCC TGCAGATCGC AAATGTTCGC ATTCGACCTG CTCGACTCCG CGAAGGAAGT CGCGAATCTG CCGGGTCTGA GTGTCTCCAT GGCCACGCTC CTGATTCCAG TACTGGGGCT GGCGAGGGTA CGCCCCGTAC GTGCCATGCC ATGACGGTCG ACCGCGACCA CAGACGGTGA GGAACCGGGT GGCAGCAGAG CGATGAAACG GCCAGGTCTG GATTTGCCTC GGGATGCAGT TACGACTGCC GGTCGTTCGT GCCGTTGGCG GTAATGCAGG GCCTCCGGGA TGGCCGACGT CGTCCAGAGT CCGGTGGACG ACTGACTGCC CCGGCCCAAG TTCCTCGTCC TCGTCCTGCG CTGCGCGCAG TTCCTGGAAA CTCTGGGTCC GTTCTCGTTC CGATTGCTCA CTGCGGTTTC TTTCGGACAG CGGAGCAGGA GGGAGGTGGC GCAGGCGGGA TAGTTTCTGG CTCGTTCTTG ATTGGGCGTG TTCTTACGTA CGTGAGATCG GCAATCTCCA GCATTTGTGA TCTGGCGAGC GAAGCGTTTG CAAGAGTTGC GTGCACTGCT CAGGACTGAC CGAGTGCCAG GTGCTTTGCA CAAAGCTCAG CTTCGGATTG TACGTGAACG ACAGCCTGTG TTGAATGCTG TTGGTCTTGT CGACGGACGA TACGCGTGAT GCAGGCAGGC ATGCAGGCCA GGCAATGCTG CTGATGGTGT AGGTGGTTGT GGTTTCGGTG TGTTCTGTCG TCACTACACG AACTCGTCTG TAGACAGAAG CGCAGCCTAA TTTTGAACGA CGAAAGTGGA AGATCATTTC ATCAGGATCG TTCTCATTGC CTCGTGGAAC GCACGTAGCA TGGCACCAGC AGCTGCTAGG GTCGCCGTAC TTCTTGCCGC AGCATGCGTC TATTCAGTCG TCGTCGACGC GCAGGCGCTG CCGTTGCGCC CGCGAGTGCC GGGAGTGGTC AGCCAGTTCA AAAATAGAAT TTTCGACGAT CACTATAGCG TTATCTGGGG CACTCCCAGA AAGCTGGACG TCGAAGGACA ACACGTGCAG CTCTCACTCG ATCGTAGTAG TGGAGGTGCG TGCTGACTGA TCTTGTTCTT GATGAGAGGT GCGAGAATTC TTTCCTTTCT TGCCAATTCC TACTTTCACT TCCTTGTACA CTCAAAGATC TGGTGACCGC GTTTGGCGAC CAGGTGGTGG ATTCTCCTCT CAGAATAAAT TTTACCATGG CTTCTTCAGC GCAAAAATCA AACTCCCTGG AAACTATTCG GCAGGAGTCG TTACGGCCTT CTACGTACGT TCTCTAAGAT CTTCATCTGC TCCAACAATG CGCGAATCAG ATTAGTGATC AGTAATCTCA GGATTCTATA TGTCGAACTT TGTCGTTCCT TGTAACCTTA CATGTGCACA TTTATAGACC ATCCAGAGTT TTATCCTTCA CTCCCTCGGT AATCCCGCCC TTGTACTTCC CTCAATAGTT TGCAAGAAGA TAGTCCGACG ATACCTGCTT ACTGAATGGG CTCTCTCATC CTACAGACCT CGAATGCGGA CGTCTACCCG AAGACTCATG ATGAATTTGA TTTCGAGTTC CTCGGGGTAG TGCCAGGCTC TCCCTATACC CTGCAGACGA ATATATATGG CGACGGAAGT ACGAAAACAG GCAGGGAAGA GAGGTTCCAC CTCTGGTTTG ATCCCACCAA AGATTACCAC CATTACAGCA TTCTGTGGAA TAAATACCAC ACAGTGTAAG TACAACTGCT TGCGAGAACT GGTGGTCTTG AGGCTCTTTA ACAAATCTTC TAAGCTTCTG GGCTTTGTAT TCTTGAATTA TAGGATGACC TGGGCATTGC GTACCAACCC TTATATCCGG CACAGCAGTT GTCCTTCTAC TAGAGGCTCA TTGCAGCCCA TACGCATGGA CATACTGTGA AGCTAGCGCA GTTGCTGTAA GGTGAGTTGT TTTCAACGAT GAGACTTCGA CTTATTGGTC CTGATCATGC GATGCAGTTT CTTAGTGGAC GACATTCCCA TAAGAGAAAT GGTGCGGTCC GAGGAGCTGG GGCTGCAGTA TCCAGCGAAG CCCATGTCGT TGTATTCAAC TATTTGGGAT GGTTCCCAGT GGGCCACACA AGGCGGCAAG TATCCCGTGA ACTACGACTT GGCTCCGTTC CAGGCCTCGT TCAAGGACCT GAAGTTGGAA GGCTGCGTGT GGAACGAAGC TGCAGAGCAG CCACCGTGCG CTTTCTCATC CTCGGCTGCT CTTAACCGGC TCGATGAAGT TGCGTTCCAG ACCCTAGACG AGAAGCAGAA ACGTGCTATG CACTGGGCTC GTAGCAGGTA CATGTGGTAC TCTTACTGTG ACGATGTGAA GCGGTACCCA CAAGCTCCCG TGGAGTGTCC CCAAAGGGCG GAAGGAGGCA CTACAGCTGT GACCTCCAGG CATCACGAGC ACAGACACGG ACAGCACAAA CGGAACAGAA ACCTGATGGA AGGAGTTGGT TTTGCTTCTA GATTCAACTC CAGAGCCTTG CAACCCGTTT TAATGATGAA TTCTCACGGG AAGTAGCTTA AGTATGTGAT GTCTTCGGCG ACCCTCTTTT TTGAAGACGA GATTCACAAT CACGTTTGGC AGAGTAAAGT CCGCTCATCA AAATGTATGT TACCGTCCTA AGGTGTCTAG AGCTGGAAAT GTGCGTGTGG AGTGGACCTC TATACTCGGT CGACATTCCT GAAGGTCGTG AATTAGCCAT GCTGAAAGAA GCAATGGAAT CACTGTCCTT CCAGTTTGTT TCGGTACAAT CCTCTAAAAG TAAAAATCCA GAGACTAGGA AACTTTGAAT TTTACTTCGC GGAACTTGTT CCTTTGTATA GATACTCATA ACAGGCCTAA ATTGCTGTGA GTTGAAATGT TACTACAGAT ACCAGGGTTG TGTCCAGAAT TAAAGACTTC TCTACTGTTC TAGTGAGAGT GTACTCTAAT TAGCTTGTTA CAGACTGATG TCATCATTCG CTGGATTCAT ATGGTGCATT TAAGTTAGAG GAGGTCAGGG GAGCTCTTTG TGGTACTGCG CTCTGCAATA CATCACCTTG GCCATTGTAA GGGCAAGGAG AAGAGTAATT CCAAATAGAT ACCTACTCAC ATTTTCTGTG GTGGTAATTT TCGCATTCTG CTCAATTTAA CTCAATAAAT CCTTGAT |
mRNA UTR + CDS |
| >Mp1g20870.1 GGAGACACAA CTGCGACACA TCTGCGATTA CTAGAATGTC CTGCGCGTCA GCTCGAGTCC AGATTCCGCT TAATCGTCCT CTGGCATAGG AGATCGACGA CTCGGAGCAC TTGTCCGCGC GCGTGCATCG ATGTAAGAGT TCAGATTTTG TCTCACGTCT GGATTGGCAT TCGGGAACGC AGTCATTGTG GCGTGTACGC CGAAGCGGCG CTGCCGGAAA CGATCGATGG GTCGAATGGA GTCGCAGTCA GATCGTACGT AAAGAACATC AGCGCGGTCT TCGCATTCAA GTCCCATTAT CCCTCGCTGG TTGGCCCTGT CCAAAACTAC ACGGCACCGG CTAGCGGATC TCAGACCGGG GGCCGGCAGT TCCTCCTGTC CCGACTCGAA CATTTCTCCT TCTGCATTAC GCTATCTCTA TCGGGTACAT TACAGGTGTA TCCGGTAGGA CGTTCTGCAC TACGGGTAGC GATTATTGCC TGCAGATCGC AAATGTTCGC ATTCGACCTG CTCGACTCCG CGAAGGAAGT CGCGAATCTG CCGGGTCTGA GTGTCTCCAT GGCCACGCTC CTGATTCCAG TACTGGGGCT GGCGAGGGTA CGCCCCGTAC GTGCCATGCC ATGACGGTCG ACCGCGACCA CAGACGGTGA GGAACCGGGT GGCAGCAGAG CGATGAAACG GCCAGGTCTG GATTTGCCTC GGGATGCAGT TACGACTGCC GGTCGTTCGT GCCGTTGGCG GTAATGCAGG GCCTCCGGGA TGGCCGACGT CGTCCAGAGT CCGGTGGACG ACTGACTGCC CCGGCCCAAG TTCCTCGTCC TCGTCCTGCG CTGCGCGCAG TTCCTGGAAA CTCTGGGTCC GTTCTCGTTC CGATTGCTCA CTGCGGTTTC TTTCGGACAG CGGAGCAGGA GGGAGGTGGC GCAGGCGGGA TAGTTTCTGG CTCGTTCTTG ATTGGGCGTG TTCTTACGTA CGTGAGATCG GCAATCTCCA GCATTTGTGA TCTGGCGAGC GAAGCGTTTG CAAGAGTTGC GTGCACTGCT CAGGACTGAC CGAGTGCCAG GTGCTTTGCA CAAAGCTCAG CTTCGGATTG TACGTGAACG ACAGCCTGTG TTGAATGCTG TTGGTCTTGT CGACGGACGA TACGCGTGAT GCAGGCAGGC ATGCAGGCCA GGCAATGCTG CTGATGGTGT AGGTGGTTGT GGTTTCGGTG TGTTCTGTCG TCACTACACG AACTCGTCTG TAGACAGAAG CGCAGCCTAA TTTTGAACGA CGAAAGTGGA AGATCATTTC ATCAGGATCG TTCTCATTGC CTCGTGGAAC GCACGTAGCA TGGCACCAGC AGCTGCTAGG GTCGCCGTAC TTCTTGCCGC AGCATGCGTC TATTCAGTCG TCGTCGACGC GCAGGCGCTG CCGTTGCGCC CGCGAGTGCC GGGAGTGGTC AGCCAGTTCA AAAATAGAAT TTTCGACGAT CACTATAGCG TTATCTGGGG CACTCCCAGA AAGCTGGACG TCGAAGGACA ACACGTGCAG CTCTCACTCG ATCGTAGTAG TGGAGGTGGT GGATTCTCCT CTCAGAATAA ATTTTACCAT GGCTTCTTCA GCGCAAAAAT CAAACTCCCT GGAAACTATT CGGCAGGAGT CGTTACGGCC TTCTACACCT CGAATGCGGA CGTCTACCCG AAGACTCATG ATGAATTTGA TTTCGAGTTC CTCGGGGTAG TGCCAGGCTC TCCCTATACC CTGCAGACGA ATATATATGG CGACGGAAGT ACGAAAACAG GCAGGGAAGA GAGGTTCCAC CTCTGGTTTG ATCCCACCAA AGATTACCAC CATTACAGCA TTCTGTGGAA TAAATACCAC ACAGTTTTCT TAGTGGACGA CATTCCCATA AGAGAAATGG TGCGGTCCGA GGAGCTGGGG CTGCAGTATC CAGCGAAGCC CATGTCGTTG TATTCAACTA TTTGGGATGG TTCCCAGTGG GCCACACAAG GCGGCAAGTA TCCCGTGAAC TACGACTTGG CTCCGTTCCA GGCCTCGTTC AAGGACCTGA AGTTGGAAGG CTGCGTGTGG AACGAAGCTG CAGAGCAGCC ACCGTGCGCT TTCTCATCCT CGGCTGCTCT TAACCGGCTC GATGAAGTTG CGTTCCAGAC CCTAGACGAG AAGCAGAAAC GTGCTATGCA CTGGGCTCGT AGCAGGTACA TGTGGTACTC TTACTGTGAC GATGTGAAGC GGTACCCACA AGCTCCCGTG GAGTGTCCCC AAAGGGCGGA AGGAGGCACT ACAGCTGTGA CCTCCAGGCA TCACGAGCAC AGACACGGAC AGCACAAACG GAACAGAAAC CTGATGGAAG GAGTTGGTTT TGCTTCTAGA TTCAACTCCA GAGCCTTGCA ACCCGTTTTA ATGATGAATT CTCACGGGAA GTAGCTTAAG TATGTGATGT CTTCGGCGAC CCTCTTTTTT GAAGACGAGA TTCACAATCA CGTTTGGCAG AGTAAAGTCC GCTCATCAAA ATGTATGTTA CCGTCCTAAG GTGTCTAGAG CTGGAAATGT GCGTGTGGAG TGGACCTCTA TACTCGGTCG ACATTCCTGA AGGTCGTGAA TTAGCCATGC TGAAAGAAGC AATGGAATCA CTGTCCTTCC AGTTTGTTTC GGTACAATCC TCTAAAAGTA AAAATCCAGA GACTAGGAAA CTTTGAATTT TACTTCGCGG AACTTGTTCC TTTGTATAGA TACTCATAAC AGGCCTAAAT TGCTGTGAGT TGAAATGTTA CTACAGATAC CAGGGTTGTG TCCAGAATTA AAGACTTCTC TACTGTTCTA GTGAGAGTGT ACTCTAATTA GCTTGTTACA GACTGATGTC ATCATTCGCT GGATTCATAT GGTGCATTTA AGTTAGAGGA GGTCAGGGGA GCTCTTTGTG GTACTGCGCT CTGCAATACA TCACCTTGGC CATTGTAAGG GCAAGGAGAA GAGTAATTCC AAATAGATAC CTACTCACAT TTTCTGTGGT GGTAATTTTC GCATTCTGCT CAATTTAACT CAATAAATCC TTGAT |
CDS |
| >Mp1g20870.1 ATGGCACCAG CAGCTGCTAG GGTCGCCGTA CTTCTTGCCG CAGCATGCGT CTATTCAGTC GTCGTCGACG CGCAGGCGCT GCCGTTGCGC CCGCGAGTGC CGGGAGTGGT CAGCCAGTTC AAAAATAGAA TTTTCGACGA TCACTATAGC GTTATCTGGG GCACTCCCAG AAAGCTGGAC GTCGAAGGAC AACACGTGCA GCTCTCACTC GATCGTAGTA GTGGAGGTGG TGGATTCTCC TCTCAGAATA AATTTTACCA TGGCTTCTTC AGCGCAAAAA TCAAACTCCC TGGAAACTAT TCGGCAGGAG TCGTTACGGC CTTCTACACC TCGAATGCGG ACGTCTACCC GAAGACTCAT GATGAATTTG ATTTCGAGTT CCTCGGGGTA GTGCCAGGCT CTCCCTATAC CCTGCAGACG AATATATATG GCGACGGAAG TACGAAAACA GGCAGGGAAG AGAGGTTCCA CCTCTGGTTT GATCCCACCA AAGATTACCA CCATTACAGC ATTCTGTGGA ATAAATACCA CACAGTTTTC TTAGTGGACG ACATTCCCAT AAGAGAAATG GTGCGGTCCG AGGAGCTGGG GCTGCAGTAT CCAGCGAAGC CCATGTCGTT GTATTCAACT ATTTGGGATG GTTCCCAGTG GGCCACACAA GGCGGCAAGT ATCCCGTGAA CTACGACTTG GCTCCGTTCC AGGCCTCGTT CAAGGACCTG AAGTTGGAAG GCTGCGTGTG GAACGAAGCT GCAGAGCAGC CACCGTGCGC TTTCTCATCC TCGGCTGCTC TTAACCGGCT CGATGAAGTT GCGTTCCAGA CCCTAGACGA GAAGCAGAAA CGTGCTATGC ACTGGGCTCG TAGCAGGTAC ATGTGGTACT CTTACTGTGA CGATGTGAAG CGGTACCCAC AAGCTCCCGT GGAGTGTCCC CAAAGGGCGG AAGGAGGCAC TACAGCTGTG ACCTCCAGGC ATCACGAGCA CAGACACGGA CAGCACAAAC GGAACAGAAA CCTGATGGAA GGAGTTGGTT TTGCTTCTAG ATTCAACTCC AGAGCCTTGC AACCCGTTTT AATGATGAAT TCTCACGGGA AGTAG |
Protein |
| >Mp1g20870.1 MAPAAARVAV LLAAACVYSV VVDAQALPLR PRVPGVVSQF KNRIFDDHYS VIWGTPRKLD VEGQHVQLSL DRSSGGGGFS SQNKFYHGFF SAKIKLPGNY SAGVVTAFYT SNADVYPKTH DEFDFEFLGV VPGSPYTLQT NIYGDGSTKT GREERFHLWF DPTKDYHHYS ILWNKYHTVF LVDDIPIREM VRSEELGLQY PAKPMSLYST IWDGSQWATQ GGKYPVNYDL APFQASFKDL KLEGCVWNEA AEQPPCAFSS SAALNRLDEV AFQTLDEKQK RAMHWARSRY MWYSYCDDVK RYPQAPVECP QRAEGGTTAV TSRHHEHRHG QHKRNRNLME GVGFASRFNS RALQPVLMMN SHGK |