Mp1g21490
Description
Annotation
| Database | ID | Description |
|---|---|---|
| PANTHER | PTHR43024 | UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE |
| SUPERFAMILY | SSF53244 | MurD-like peptide ligases, peptide-binding domain |
| Gene3D | G3DSA:3.40.1190.10 | - |
| SUPERFAMILY | SSF53623 | MurD-like peptide ligases, catalytic domain |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| Pfam | PF08245 | Mur ligase middle domain |
| Pfam | PF02875 | Mur ligase family, glutamate ligase domain |
| Pfam | PF01225 | Mur ligase family, catalytic domain |
| Hamap | MF_02019 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. |
| Gene3D | G3DSA:3.90.190.20 | - |
| SUPERFAMILY | SSF63418 | MurE/MurF N-terminal domain |
| Gene3D | G3DSA:3.40.1390.10 | - |
| KEGG | K01929 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] |
| MapolyID | Mapoly0001s0484 | - |
| GO | GO:0047480 | UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity |
| GO | GO:0005524 | ATP binding |
| GO | GO:0016881 | acid-amino acid ligase activity |
| GO | GO:0009058 | biosynthetic process |
| GO | GO:0071555 | cell wall organization |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpMurF | Peptidoglycan biosynthesis | Provisional |
Associated Literature (AI-based literature mining, Beta-version)
Negative control: CRISPR loss-of-function MpmurF mutants show glyphosate sensitivity not significantly different from WT, demonstrating MpMurA-conferred tolerance is independent of chloroplast peptidoglycan biosynthesis.
1 core 0 peripheral
Caygill, S., et al. (2024)
· Proceeding of the National Academy of Sciences USA research experimental subject
Negative control: CRISPR loss-of-function MpmurF mutants show glyphosate sensitivity not significantly different from WT, demonstrating MpMurA-conferred tolerance is independent of chloroplast peptidoglycan biosynthesis.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp1g21490 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g21490.1 GGATCGAAAA GACCGACGGG ACGGAGCTCT GCCCTCCGGT CCACCTAGCG TGCAGACGGC GTGGTGAGGT GATGTGATGT GGGGATGAGA GTGGCAGCGG ATGAGATGAG CGGGCTTTTA CCTCTGACGA CGAGTCCCCA TTCGAGCCGT CGGTGTAGCG ATGTGAGCTC GGGCCCCCGG TCGCTGCTCT TGTGCAGTGC GAGGGTTCGA GCAGGTCTGC AGATCCATCG GCGAGCGAGG TTCTACCGAT CGTTCACATG CCGCGTGAAT TCGTCCGACC CCCTTTCGGA GGGGGCCGGC GGAGGCTCGC AAGACTATGG TTGGAGTTGT GATGACGGTG GTGTCGTGTG GGACGCTAGC CGGCTTGCAC GAGCGGTCGG TGGAGATGTT GTGCAATGGG GTTCTCCTGG AAGCATTTGC ACCGATAGTC GGAAAATCAA CCGAGGGCAA TGGTTTCTTG CTCTTGTAGG GCCCAAATTT GATGGGCATG ATTTTTTGCA ACAAGCTTTA GATCGTGGTT GTGCTGGAGT AATCGGACAG AATGTTAGCT CCGATTGGCC TCGCGGGTTT ATCAGGATCG AATGCTCCTT AGACGCTCTT CATCTCTTAG CGACGTACGT GAGGAGATTG TATAGAGGAC CCGTTGTAGG CATTACAGGA AGCACTGGCA AGACCACAGC GAGGGCCATG ACATCTCTTG CTTTGAAATC CTTGGGTCAT GTCCACCAGA CAGAAGGAAA CTTCAATAAC CATATAGGAG TTCCTCTTAC ACTTCTTAAA CTTCCCTTCA GAAATTCTGC TTGTATTTTG GAGATGGGGA TGAGCGCTGC TGGAGAGATG GAGGTTCTTG CAAGGATTGC TGAACCATCT GTTAGAGTTC TGTTGAATGT TGGCCCGGCG CATATGGAGA ACTTTGAGAA GCTGGAGCAT GTGGCTGCGG CCAAGGGAGA GCTTTTTAGC TGTGCAAGAC CGGGAGACGT TTGCATTTTG AATGCCGATG ATCCTCTTAT CATGGGTTTG ATTCTCCCAC CTGCAGTGCA AGTGGTAATT ATATCTCAAC TGTTTCTTAT GTCACTACTT AGTGTTCACA TTTCCTTTAT AAAAAGCCTG AAAGACATAT CTTCGTCTCG AAGTCTGGCC AAGCAATATG CAATAATTTC CAATATGCGG CAACAGCTGC GGTTTGTAAT GACTGAATTT ATGTTCACAG TCATAACAAT GTGAAATTAA GAGTGAGCAA CACGGGTCAT GGAAAAGTAC CCACCGCCAT GCTTGCCATT GACCGATGAT CTTCTTCTGA CACATTATTG TATACAGATA TTTTTTGGAA GACGAGCAGG ATGTCATGTC AAGCTTGTGG AAGCAGCAGT AACTGAAGGA GGTCGCGGTG TCCATGTAAT TCTTGAGCAG TCCAGCTATG GAAGTATCAC CGTGGAAAAC TTTAACTCTG GATCCCAGAT TTTGGAAAAT TTACTTACTG AGAAACCCAT ACACACACAT CCTCAGAAAC CTTTTGATGG CGCGGCTGTC GGACGGGACT ATCACTCTAG AACGGTGTTC GATATCTCAT CCCCGGGGTT ACATCTAGCT ATGAACGCCT GTGCTGCGGC TGCTGTTGCT GTTGCCCTTC GCATTCCTGT AGAGAAAGTT TGCAAAACGT TAAGTGAATA TTCGCCTGTT GGGAGGCGGT CCAGACTTGA ACAAGTCGGA AATGTTCATA TTTTAGATGA TGCCTATAAC TCGAATCCTA TGAGCTTGGA GTCAAGTCTA AGATCCCTCT CCTACATGGA TTCCAAAAAC AGGAGGGTAG CCTTTCTGGG CGATATGTTA GAACTTGGTA GAGTCTCAGA GGATGCGCAT CAAACTGCCC TTGCACTCTG CACGGAGCTG CAGTTGGATT ACGTTGGTCT CGTTGGTCAG TGCTTCGCCA AAGCTGCAAT GTCTTTGGGG ATGACGACCA ATAACTTTAA CTCTTTTGAG GACTCGGAGC AGCTTGCGAA GCAGGTTGAT TTTATCCTAG AACCAGGTGA TACCGTTCTG GTCAAAGGTA GTCGAGGAAT GAAAATGGAA GCCGTCGTTG ATGCGATAAG GAGAATGACA ATCACGTAAT ACATATCGAC TGGAGTATCG ATTTGATTC |
mRNA UTR + CDS |
| >Mp1g21490.1 GGATCGAAAA GACCGACGGG ACGGAGCTCT GCCCTCCGGT CCACCTAGCG TGCAGACGGC GTGGTGAGGT GATGTGATGT GGGGATGAGA GTGGCAGCGG ATGAGATGAG CGGGCTTTTA CCTCTGACGA CGAGTCCCCA TTCGAGCCGT CGGTGTAGCG ATGTGAGCTC GGGCCCCCGG TCGCTGCTCT TGTGCAGTGC GAGGGTTCGA GCAGGTCTGC AGATCCATCG GCGAGCGAGG TTCTACCGAT CGTTCACATG CCGCGTGAAT TCGTCCGACC CCCTTTCGGA GGGGGCCGGC GGAGGCTCGC AAGACTATGG TTGGAGTTGT GATGACGGTG GTGTCGTGTG GGACGCTAGC CGGCTTGCAC GAGCGGTCGG TGGAGATGTT GTGCAATGGG GTTCTCCTGG AAGCATTTGC ACCGATAGTC GGAAAATCAA CCGAGGGCAA TGGTTTCTTG CTCTTGTAGG GCCCAAATTT GATGGGCATG ATTTTTTGCA ACAAGCTTTA GATCGTGGTT GTGCTGGAGT AATCGGACAG AATGTTAGCT CCGATTGGCC TCGCGGGTTT ATCAGGATCG AATGCTCCTT AGACGCTCTT CATCTCTTAG CGACGTACGT GAGGAGATTG TATAGAGGAC CCGTTGTAGG CATTACAGGA AGCACTGGCA AGACCACAGC GAGGGCCATG ACATCTCTTG CTTTGAAATC CTTGGGTCAT GTCCACCAGA CAGAAGGAAA CTTCAATAAC CATATAGGAG TTCCTCTTAC ACTTCTTAAA CTTCCCTTCA GAAATTCTGC TTGTATTTTG GAGATGGGGA TGAGCGCTGC TGGAGAGATG GAGGTTCTTG CAAGGATTGC TGAACCATCT GTTAGAGTTC TGTTGAATGT TGGCCCGGCG CATATGGAGA ACTTTGAGAA GCTGGAGCAT GTGGCTGCGG CCAAGGGAGA GCTTTTTAGC TGTGCAAGAC CGGGAGACGT TTGCATTTTG AATGCCGATG ATCCTCTTAT CATGGGTTTG ATTCTCCCAC CTGCAGTGCA AGTGATATTT TTTGGAAGAC GAGCAGGATG TCATGTCAAG CTTGTGGAAG CAGCAGTAAC TGAAGGAGGT CGCGGTGTCC ATGTAATTCT TGAGCAGTCC AGCTATGGAA GTATCACCGT GGAAAACTTT AACTCTGGAT CCCAGATTTT GGAAAATTTA CTTACTGAGA AACCCATACA CACACATCCT CAGAAACCTT TTGATGGCGC GGCTGTCGGA CGGGACTATC ACTCTAGAAC GGTGTTCGAT ATCTCATCCC CGGGGTTACA TCTAGCTATG AACGCCTGTG CTGCGGCTGC TGTTGCTGTT GCCCTTCGCA TTCCTGTAGA GAAAGTTTGC AAAACGTTAA GTGAATATTC GCCTGTTGGG AGGCGGTCCA GACTTGAACA AGTCGGAAAT GTTCATATTT TAGATGATGC CTATAACTCG AATCCTATGA GCTTGGAGTC AAGTCTAAGA TCCCTCTCCT ACATGGATTC CAAAAACAGG AGGGTAGCCT TTCTGGGCGA TATGTTAGAA CTTGGTAGAG TCTCAGAGGA TGCGCATCAA ACTGCCCTTG CACTCTGCAC GGAGCTGCAG TTGGATTACG TTGGTCTCGT TGGTCAGTGC TTCGCCAAAG CTGCAATGTC TTTGGGGATG ACGACCAATA ACTTTAACTC TTTTGAGGAC TCGGAGCAGC TTGCGAAGCA GGTTGATTTT ATCCTAGAAC CAGGTGATAC CGTTCTGGTC AAAGGTAGTC GAGGAATGAA AATGGAAGCC GTCGTTGATG CGATAAGGAG AATGACAATC ACGTAATACA TATCGACTGG AGTATCGATT TGATTC |
CDS |
| >Mp1g21490.1 ATGAGAGTGG CAGCGGATGA GATGAGCGGG CTTTTACCTC TGACGACGAG TCCCCATTCG AGCCGTCGGT GTAGCGATGT GAGCTCGGGC CCCCGGTCGC TGCTCTTGTG CAGTGCGAGG GTTCGAGCAG GTCTGCAGAT CCATCGGCGA GCGAGGTTCT ACCGATCGTT CACATGCCGC GTGAATTCGT CCGACCCCCT TTCGGAGGGG GCCGGCGGAG GCTCGCAAGA CTATGGTTGG AGTTGTGATG ACGGTGGTGT CGTGTGGGAC GCTAGCCGGC TTGCACGAGC GGTCGGTGGA GATGTTGTGC AATGGGGTTC TCCTGGAAGC ATTTGCACCG ATAGTCGGAA AATCAACCGA GGGCAATGGT TTCTTGCTCT TGTAGGGCCC AAATTTGATG GGCATGATTT TTTGCAACAA GCTTTAGATC GTGGTTGTGC TGGAGTAATC GGACAGAATG TTAGCTCCGA TTGGCCTCGC GGGTTTATCA GGATCGAATG CTCCTTAGAC GCTCTTCATC TCTTAGCGAC GTACGTGAGG AGATTGTATA GAGGACCCGT TGTAGGCATT ACAGGAAGCA CTGGCAAGAC CACAGCGAGG GCCATGACAT CTCTTGCTTT GAAATCCTTG GGTCATGTCC ACCAGACAGA AGGAAACTTC AATAACCATA TAGGAGTTCC TCTTACACTT CTTAAACTTC CCTTCAGAAA TTCTGCTTGT ATTTTGGAGA TGGGGATGAG CGCTGCTGGA GAGATGGAGG TTCTTGCAAG GATTGCTGAA CCATCTGTTA GAGTTCTGTT GAATGTTGGC CCGGCGCATA TGGAGAACTT TGAGAAGCTG GAGCATGTGG CTGCGGCCAA GGGAGAGCTT TTTAGCTGTG CAAGACCGGG AGACGTTTGC ATTTTGAATG CCGATGATCC TCTTATCATG GGTTTGATTC TCCCACCTGC AGTGCAAGTG ATATTTTTTG GAAGACGAGC AGGATGTCAT GTCAAGCTTG TGGAAGCAGC AGTAACTGAA GGAGGTCGCG GTGTCCATGT AATTCTTGAG CAGTCCAGCT ATGGAAGTAT CACCGTGGAA AACTTTAACT CTGGATCCCA GATTTTGGAA AATTTACTTA CTGAGAAACC CATACACACA CATCCTCAGA AACCTTTTGA TGGCGCGGCT GTCGGACGGG ACTATCACTC TAGAACGGTG TTCGATATCT CATCCCCGGG GTTACATCTA GCTATGAACG CCTGTGCTGC GGCTGCTGTT GCTGTTGCCC TTCGCATTCC TGTAGAGAAA GTTTGCAAAA CGTTAAGTGA ATATTCGCCT GTTGGGAGGC GGTCCAGACT TGAACAAGTC GGAAATGTTC ATATTTTAGA TGATGCCTAT AACTCGAATC CTATGAGCTT GGAGTCAAGT CTAAGATCCC TCTCCTACAT GGATTCCAAA AACAGGAGGG TAGCCTTTCT GGGCGATATG TTAGAACTTG GTAGAGTCTC AGAGGATGCG CATCAAACTG CCCTTGCACT CTGCACGGAG CTGCAGTTGG ATTACGTTGG TCTCGTTGGT CAGTGCTTCG CCAAAGCTGC AATGTCTTTG GGGATGACGA CCAATAACTT TAACTCTTTT GAGGACTCGG AGCAGCTTGC GAAGCAGGTT GATTTTATCC TAGAACCAGG TGATACCGTT CTGGTCAAAG GTAGTCGAGG AATGAAAATG GAAGCCGTCG TTGATGCGAT AAGGAGAATG ACAATCACGT AA |
Protein |
| >Mp1g21490.1 MRVAADEMSG LLPLTTSPHS SRRCSDVSSG PRSLLLCSAR VRAGLQIHRR ARFYRSFTCR VNSSDPLSEG AGGGSQDYGW SCDDGGVVWD ASRLARAVGG DVVQWGSPGS ICTDSRKINR GQWFLALVGP KFDGHDFLQQ ALDRGCAGVI GQNVSSDWPR GFIRIECSLD ALHLLATYVR RLYRGPVVGI TGSTGKTTAR AMTSLALKSL GHVHQTEGNF NNHIGVPLTL LKLPFRNSAC ILEMGMSAAG EMEVLARIAE PSVRVLLNVG PAHMENFEKL EHVAAAKGEL FSCARPGDVC ILNADDPLIM GLILPPAVQV IFFGRRAGCH VKLVEAAVTE GGRGVHVILE QSSYGSITVE NFNSGSQILE NLLTEKPIHT HPQKPFDGAA VGRDYHSRTV FDISSPGLHL AMNACAAAAV AVALRIPVEK VCKTLSEYSP VGRRSRLEQV GNVHILDDAY NSNPMSLESS LRSLSYMDSK NRRVAFLGDM LELGRVSEDA HQTALALCTE LQLDYVGLVG QCFAKAAMSL GMTTNNFNSF EDSEQLAKQV DFILEPGDTV LVKGSRGMKM EAVVDAIRRM TIT |