Mp1g21950
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls |
| SUPERFAMILY | SSF51182 | RmlC-like cupins |
| Pfam | PF07883 | Cupin domain |
| PANTHER | PTHR36440 | PUTATIVE (AFU_ORTHOLOGUE AFUA_8G07350)-RELATED |
| MapolyID | Mapoly0001s0531 | - |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpCupin4 | Cupin | Provisional |
This is a provisional entry. If you want to update the entry, please contact the administrator.
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp1g21950 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g21950.1 GAGTTGCAGA GCATGGAGAG AGGCGGTGCA CGAGCCAAGT GGCAGCAGGG CTCGTGTCAC AAGTGCGAGC GATGGATGCA AAGTCTCATC AGCTTCAGAA CGATCGGCAC TCGAAATTGT GATCCGTTTC GTCTCCTCTC GCCGATTTGA TTTCGAAAGT GCTTCGACGC ATGCGAAGAA CATTGCGGTG CGGCCGATGA GCTTTCGTCT GGTGGATGAT GCCGCGGAGA GCTCGACCTT GTTTTTTGGT GCAGCAAGTG AAATTTCGTG CGTATTGTAG TACTTAATAG TTGGGAATGT CTCGAGGCCT GACCGAATCC GAATCTTTGG CATTAGATGC GTTGAAAATT TGTCAACATT TCAGGCTCCG TTGTCAAAGT TTGCCCCTTG CTTGTCGGTG TGCTTGCGGT GTTGGTTTTA GCCCCCTGAT GTTGGGTTCC CGAGGTGAGA GGGCAAGAGT GACTTCGTAT CCAATCTGTT CAGAATTAAG AATTTGACGG AATTGAGGTG AGATTCAGTA TTCAGAATTC TCAGCATCTC CCCCTATTCA TGCTGTTAGA ATCTGTTGAG CTTTTCTTAA ATTTGAGATT AATTTGGAGC AACTGTCCTG TGTCATCTGT TATGCAGATC TGGAGATGCA TGGACGGGAT TTTCCAGAAT TATAGATTTT CAGAGAATCA GAGAGACAAG CAGTTGATAG TGAAGCGATT GTGTTGTAGC TACAGATTCA GGGAACAACG TTGACAATCA TCATCCCAAC AGGACTGAAT TTAGCGATAA AAAACATGGA CCAGGTCTCC TACATTGGTG ACCAATTTTC TGCCGTCACC GCACCTTACG TGGCCATGGT CGGTGCAGGT AATTAGTTCG AACGTGGAAA TGTTTGTTGT CCTTCAAATT TCCAAAATGG GCTTCAGGAA AAGTTCTGCA CATGGTTTTG TCGGAAATTG ATAGTTGCGT TCCGAATCCG ATGTACTTTT CTTGGAGCTC TGCCGAATAG CTCTCGGCAG TCTTGTTCAC CACAGGCAGA TCTATATTCT ACTGTCGTGT GCTGTTTCAG CAAGACTAGA GATTGAACAT CCAAATTTGC TCTGTGTGCA GGCGAAGGAC GGAGTTTTTG GGTTTTCGGA ATCCTTGTAA CGATGAAGGT TTTTGGAGAT CAAACAAGAG GTTCTTATGC TTGTTTCGAA AACACTGTAA GTCCAGGAGT GGCACCACCG CTGCACATTC ATACACATGA AGCCGAGACT TGGTACTTGC TTGACGGCGA GATGATATGG ACAGTTGGCC GTCAGACATT TCACGCCCGC AAAGGATCAT TCATGCATCT ACCTCCCTAC GTCGCTCATA CATTTGCCAA CAATTTTGAC AAACCTGCGC AGATGCTGCT CACATTTGCT CCATCAGGGT TCGAGAAGTG GTTCACTCGA ATCGGGGTCC CTGTGATGAA CTCCTCAGCT CCAGGTGATC CTCCTCTGAC GAGCGGGCAA GATTTGAAGA TAGCCCAAAA TTTAGCTGGA GATTATGGCG TCATTTTCGC AGGTCCTTCA CTTGATGCTA ACGGTGAACT CAAATTAGAA TTCAGTTAGA TGAATGTACA GTATTGAGAA TTGTACAGAG TAACGTATTA TGATTAGCAA AGTCTTACTG AATGACACGA ATGGAAATCA AATACGACCT TTAAGGAGCG AGTCGAACTG TCAGGGTGAA AGTGCGTCTG TCCAGAAACA TATAAGCAGT TGTATATTCA GAGTCTCGAG TAGTAATTTG TTAAATTCAT CAATGTACAT TTTTCATTAA AGTCTCTCAT CCCAGAGGGA AGGCGAGTCA TCGGTTCCTT |
mRNA UTR + CDS |
| >Mp1g21950.1 GAGTTGCAGA GCATGGAGAG AGGCGGTGCA CGAGCCAAGT GGCAGCAGGG CTCGTGTCAC AAGTGCGAGC GATGGATGCA AAGTCTCATC AGCTTCAGAA CGATCGGCAC TCGAAATTGT GATCCGTTTC GTCTCCTCTC GCCGATTTGA TTTCGAAAGT GCTTCGACGC ATGCGAAGAA CATTGCGGTG CGGCCGATGA GCTTTCGTCT GGTGGATGAT GCCGCGGAGA GCTCGACCTT GTTTTTTGGT GCAGCAAGTG AAATTTCATC TGGAGATGCA TGGACGGGAT TTTCCAGAAT TATAGATTTT CAGAGAATCA GAGAGACAAG CAGTTGATAG TGAAGCGATT GTGTTGTAGC TACAGATTCA GGGAACAACG TTGACAATCA TCATCCCAAC AGGACTGAAT TTAGCGATAA AAAACATGGA CCAGGTCTCC TACATTGGTG ACCAATTTTC TGCCGTCACC GCACCTTACG TGGCCATGGT CGGTGCAGGC GAAGGACGGA GTTTTTGGGT TTTCGGAATC CTTGTAACGA TGAAGGTTTT TGGAGATCAA ACAAGAGGTT CTTATGCTTG TTTCGAAAAC ACTGTAAGTC CAGGAGTGGC ACCACCGCTG CACATTCATA CACATGAAGC CGAGACTTGG TACTTGCTTG ACGGCGAGAT GATATGGACA GTTGGCCGTC AGACATTTCA CGCCCGCAAA GGATCATTCA TGCATCTACC TCCCTACGTC GCTCATACAT TTGCCAACAA TTTTGACAAA CCTGCGCAGA TGCTGCTCAC ATTTGCTCCA TCAGGGTTCG AGAAGTGGTT CACTCGAATC GGGGTCCCTG TGATGAACTC CTCAGCTCCA GGTGATCCTC CTCTGACGAG CGGGCAAGAT TTGAAGATAG CCCAAAATTT AGCTGGAGAT TATGGCGTCA TTTTCGCAGG TCCTTCACTT GATGCTAACG GTGAACTCAA ATTAGAATTC AGTTAGATGA ATGTACAGTA TTGAGAATTG TACAGAGTAA CGTATTATGA TTAGCAAAGT CTTACTGAAT GACACGAATG GAAATCAAAT ACGACCTTTA AGGAGCGAGT CGAACTGTCA GGGTGAAAGT GCGTCTGTCC AGAAACATAT AAGCAGTTGT ATATTCAGAG TCTCGAGTAG TAATTTGTTA AATTCATCAA TGTACATTTT TCATTAAAGT CTCTCATCCC AGAGGGAAGG CGAGTCATCG GTTCCTT |
CDS |
| >Mp1g21950.1 ATGGACCAGG TCTCCTACAT TGGTGACCAA TTTTCTGCCG TCACCGCACC TTACGTGGCC ATGGTCGGTG CAGGCGAAGG ACGGAGTTTT TGGGTTTTCG GAATCCTTGT AACGATGAAG GTTTTTGGAG ATCAAACAAG AGGTTCTTAT GCTTGTTTCG AAAACACTGT AAGTCCAGGA GTGGCACCAC CGCTGCACAT TCATACACAT GAAGCCGAGA CTTGGTACTT GCTTGACGGC GAGATGATAT GGACAGTTGG CCGTCAGACA TTTCACGCCC GCAAAGGATC ATTCATGCAT CTACCTCCCT ACGTCGCTCA TACATTTGCC AACAATTTTG ACAAACCTGC GCAGATGCTG CTCACATTTG CTCCATCAGG GTTCGAGAAG TGGTTCACTC GAATCGGGGT CCCTGTGATG AACTCCTCAG CTCCAGGTGA TCCTCCTCTG ACGAGCGGGC AAGATTTGAA GATAGCCCAA AATTTAGCTG GAGATTATGG CGTCATTTTC GCAGGTCCTT CACTTGATGC TAACGGTGAA CTCAAATTAG AATTCAGTTA G |
Protein |
| >Mp1g21950.1 MDQVSYIGDQ FSAVTAPYVA MVGAGEGRSF WVFGILVTMK VFGDQTRGSY ACFENTVSPG VAPPLHIHTH EAETWYLLDG EMIWTVGRQT FHARKGSFMH LPPYVAHTFA NNFDKPAQML LTFAPSGFEK WFTRIGVPVM NSSAPGDPPL TSGQDLKIAQ NLAGDYGVIF AGPSLDANGE LKLEFS |