Mp1g23200
Description
Annotation
| Database | ID | Description |
|---|---|---|
| SMART | SM00769 | why |
| Pfam | PF03168 | Late embryogenesis abundant protein |
| PANTHER | PTHR31459 | - |
| Gene3D | G3DSA:2.60.40.1820 | - |
| SUPERFAMILY | SSF117070 | LEA14-like |
| MapolyID | Mapoly0065s0058 | - |
| GO | GO:0005829 | cytosol |
| GO | GO:0009269 | response to desiccation |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpLEA-like4 | Late-embryogenesis abundant protein | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp1g23200 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g23200.1 AAGAGTACAG GGAGGAGAGG ATGCAAGTCT AAGGGACACG AGGAGTCTGG GACTGCGCGT GAAGCGGAAG CGTCATCGCG CAGAGCCAGT GTCACGAGAT CGTTCAACAG GAAGCTCAAG GATTCCAACC ATTGCATACG TGGCCGAGCA GGGCGACCGC GACTGAAAAT GTGCCACGCG TGAAGTCATA GCAGATCCAA ACCAGCAGCA CCAGCTGGGC GAGCCTCCGG CCGACACCAG GGAGTCGGAA CAGATGCAGA CGGTTGACGT GTCGTGGAGG TTTCTTCGGC ACCAGATTTT CCGGGGCCTC GCAGACTTCG ACGACTTCTG CAGTTCTACC GCTGTGGCAT ATAAATCTGC GGCAGCTTCT GAACATAGCG TACCAATCGC ATCCTTTCAT TCGCAGCCCA AGTTAGCAGA CGCTGGTCCA TCCCAGTTTC GTTGTACACG GCGGCGTACT CTTCTTAGTC CAGTGACAGT GACAGCTGCA GCTCAGATTT ACAGTTGAAA CCTCGGATCG ATCGGACAAG ATGTCGAGCT TGATCCAGAA AGCCAAGGAG ATGGCTGTGG ACAAGCTGTC CCAAGTGCCC AAGCCGTCAT GTGAGCTATC AGATCTGGAC TTCAAGGACG TGAGTAGGAA GAATGTGACC ATGGCGGGCA TCGTATCGAT CACCAACCCT TACGATCATG ACCTGCCGGT CGTCACTATC ACCTACAAGA TCTTCTCGAA CAACCGGTAC AGTCTTACAC ATTCTCGTAC CTTTTTCTCC ATGCGGGCTA CATTCTTTCA TCCTTCTACT CTGAGACAGA TCATTGAATC AGTACTGACC ACAATCTCGC AAATTTAGAC TGTTTCATCT CGTTCGGATT TTGGGGTGGC AGTTGTAGAT TAGGAAGCTT GATGTACTTG ATTCTGGCTA GATGGAAAAT TTGATTCTAA TCGACACTTC TGGCATGACA ATCAGTCTTT AGATTGTGAA ATCAGACATG ACCACTCAGT TCCTAATAAC ACCACCGCTT CGAATCTAGC TAAATTGTTA GAAATGTGAA TAGCGCTTAA GTATACTCAT GAACAACTGT TTGTGACTCG CAGAGAGATT GGATCAGGAC AGCTAACAGA CCCAGGTGAC ATCAAAGCTC TCGACAAGAC AAACATCGAA CTTCCAACAG TAGTACCTTA TGACTTTCTG TGGAACCTGA TGAAAGACGT CGGAGCTGAT TGGGACATCG ATTACAAATT CGAAGTGGGC GTTCAGTTCA AACTGCCTAT AGTCGGCAAA TTCACCCTGC CGTTGGAAAC ATCCGGAACT ATGAAGCTTC CAACACTCTC AGACATGTTT TAGACAGGTG TTATCTTCCA TACATTCTGT ATTTTGCTGA TATGTAAATA AAACTTCGGA ACTGAAAAAA ATAAAAAAGT AGAACATTCT CTTCAC |
mRNA UTR + CDS |
| >Mp1g23200.1 AAGAGTACAG GGAGGAGAGG ATGCAAGTCT AAGGGACACG AGGAGTCTGG GACTGCGCGT GAAGCGGAAG CGTCATCGCG CAGAGCCAGT GTCACGAGAT CGTTCAACAG GAAGCTCAAG GATTCCAACC ATTGCATACG TGGCCGAGCA GGGCGACCGC GACTGAAAAT GTGCCACGCG TGAAGTCATA GCAGATCCAA ACCAGCAGCA CCAGCTGGGC GAGCCTCCGG CCGACACCAG GGAGTCGGAA CAGATGCAGA CGGTTGACGT GTCGTGGAGG TTTCTTCGGC ACCAGATTTT CCGGGGCCTC GCAGACTTCG ACGACTTCTG CAGTTCTACC GCTGTGGCAT ATAAATCTGC GGCAGCTTCT GAACATAGCG TACCAATCGC ATCCTTTCAT TCGCAGCCCA AGTTAGCAGA CGCTGGTCCA TCCCAGTTTC GTTGTACACG GCGGCGTACT CTTCTTAGTC CAGTGACAGT GACAGCTGCA GCTCAGATTT ACAGTTGAAA CCTCGGATCG ATCGGACAAG ATGTCGAGCT TGATCCAGAA AGCCAAGGAG ATGGCTGTGG ACAAGCTGTC CCAAGTGCCC AAGCCGTCAT GTGAGCTATC AGATCTGGAC TTCAAGGACG TGAGTAGGAA GAATGTGACC ATGGCGGGCA TCGTATCGAT CACCAACCCT TACGATCATG ACCTGCCGGT CGTCACTATC ACCTACAAGA TCTTCTCGAA CAACCGAGAG ATTGGATCAG GACAGCTAAC AGACCCAGGT GACATCAAAG CTCTCGACAA GACAAACATC GAACTTCCAA CAGTAGTACC TTATGACTTT CTGTGGAACC TGATGAAAGA CGTCGGAGCT GATTGGGACA TCGATTACAA ATTCGAAGTG GGCGTTCAGT TCAAACTGCC TATAGTCGGC AAATTCACCC TGCCGTTGGA AACATCCGGA ACTATGAAGC TTCCAACACT CTCAGACATG TTTTAGACAG GTGTTATCTT CCATACATTC TGTATTTTGC TGATATGTAA ATAAAACTTC GGAACTGAAA AAAATAAAAA AGTAGAACAT TCTCTTCAC |
CDS |
| >Mp1g23200.1 ATGTCGAGCT TGATCCAGAA AGCCAAGGAG ATGGCTGTGG ACAAGCTGTC CCAAGTGCCC AAGCCGTCAT GTGAGCTATC AGATCTGGAC TTCAAGGACG TGAGTAGGAA GAATGTGACC ATGGCGGGCA TCGTATCGAT CACCAACCCT TACGATCATG ACCTGCCGGT CGTCACTATC ACCTACAAGA TCTTCTCGAA CAACCGAGAG ATTGGATCAG GACAGCTAAC AGACCCAGGT GACATCAAAG CTCTCGACAA GACAAACATC GAACTTCCAA CAGTAGTACC TTATGACTTT CTGTGGAACC TGATGAAAGA CGTCGGAGCT GATTGGGACA TCGATTACAA ATTCGAAGTG GGCGTTCAGT TCAAACTGCC TATAGTCGGC AAATTCACCC TGCCGTTGGA AACATCCGGA ACTATGAAGC TTCCAACACT CTCAGACATG TTTTAG |
Protein |
| >Mp1g23200.1 MSSLIQKAKE MAVDKLSQVP KPSCELSDLD FKDVSRKNVT MAGIVSITNP YDHDLPVVTI TYKIFSNNRE IGSGQLTDPG DIKALDKTNI ELPTVVPYDF LWNLMKDVGA DWDIDYKFEV GVQFKLPIVG KFTLPLETSG TMKLPTLSDM F |