Mp1g25500
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Pfam | PF06330 | Trichodiene synthase (TRI5) |
| Gene3D | G3DSA:1.10.600.10 | Farnesyl Diphosphate Synthase |
| SUPERFAMILY | SSF48576 | Terpenoid synthases |
| MapolyID | Mapoly0002s0322 | - |
| GO | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpMTPSL9 | Secondary metabolism enzyme, Terpene biosynthesis enzymes | Provisional |
Associated Literature (AI-based literature mining, Beta-version)
Sesquiterpene synthase with high activity on all-trans FPP (250.5 pmol/h/ug), the second-highest specific activity among the characterized synthases.
1 core 1 peripheral
Kumar, S., et al. (2016)
· Plant Cell research experimental subject
Sesquiterpene synthase with high activity on all-trans FPP (250.5 pmol/h/ug), the second-highest specific activity among the characterized synthases.
Takizawa, R., et al. (2021a)
· Plant & Cell Physiology 62 528-537 research experimental comparator
Group III fungal-type TPS (comparison).
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp1g25500 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g25500.1 GCCATGAACT TTGGATCCGT GCTAATCTTT TCACCAGAAT AGTTCGACTG AAGAAGAGAA ACTTTGGCCA CATCCACGGC AGAGATGACG AAGACGCTTC CGGCTGCGAC GTTTAATGTG GGCAACAATG TGCTCCTCTC CAGAGAAGAA TACATTAGAA AGCTGCGCAG CAGATACGAG AAGTTCTTGA AAGATATATG TTACGTCAAC ACCCGTGAGA GCTGCACTTC TGATGCGACG GATGAGATCT ACGCTGCTCT CTCGAGCATA CTTCCAGCAA CCAACAGATT GCCCGAGAAT TTGATCCTAG GATGCACTGT ATTTGGAGGT TTGGTTTCCA AGACAGATAC GCTCCAGAAC CGGATAAAAG TTGCCCATTT CTCAGCTTTG GTAGCAACAT TTGACTCGCT TATGCAGGCT TCTAGCTTGC TCTCGATGCC TGATGGTGGA GCTCGCGTGA AGGAAGACTG TGGCCTTTTC ATCCTCAAGC TCATCAGTCC TGCAACGTAC GAGAAACATT ATCACTCACG TGGACCTCTG CATCCTATTA AAATAGGATA CAGCAATTGA TCGACTGGCT GCAGACAGAT CAGAATCCTT TCTTACCGTT GCACCCTCGA CTTCACATGA CGTGCGTCAC AGTAGTCGTG CGCTTCGTGG AAGTGTGTCT ACTGGAGCAC GAGTTGACGG AGAGTGGGTT TCAGATCGAG CCTGAAATGC AGGGCTTTCC TCAACATGTA CGAGAAAAAT CTGGCATTGC CGAAGCGTAC ACTCTTATGG TCCTCGTTGC GCCTCATCTA GTTCCACAGA ACTATTCTTC CGAAGATGGA AAGGCGGACC ACTCTTTCTT TTACAACAAG ATATATCCAC TGATCCCTGA GATAAATGCT GCCGTCGACA AAATCAACGA CATTTTGTCC TATTACAAGG AGTTCGAGGA CGAAGATGAA TGTATGGCCT ACATTAGCAG CACGGCGAAA CTGAAGCAAA TCACCACATA CGAGGTTCTC GATGATCTGA TGGACGAAAT GGTGGAGACC CGGAAAAACT GCATGGCGAT AGCAGAGAGG AGCGGGTCTC GGGAGGTGGT GGCGACTGTA GCTGCGTTCT TTCAGGGATA TATATCGTTT CACTTCACCT GGAACTCACG TTATAAACTT AGAGAGCTAT TCGGTGACGA CTGGTTCGCG GGTGACTGTG TGTAGATCGT AAGTAGGATA AGTGTGTAAG TAGATGATCA CGAACAACTC ATCATCTACT TACATAGAAG AAAATAAAAT CATTTGTTGT AGTTTTCAGG TGTGGATGCC AAGCACCTGC CACTTCTTTG TACGTACAAT GGAGTACACA ATTTATACCA GGTTCTCGTA CCATGATGGT CAGAAAGCGA AGTGATGTCT CCTCTGTGAC ACGATTGGC |
mRNA UTR + CDS |
| >Mp1g25500.1 GCCATGAACT TTGGATCCGT GCTAATCTTT TCACCAGAAT AGTTCGACTG AAGAAGAGAA ACTTTGGCCA CATCCACGGC AGAGATGACG AAGACGCTTC CGGCTGCGAC GTTTAATGTG GGCAACAATG TGCTCCTCTC CAGAGAAGAA TACATTAGAA AGCTGCGCAG CAGATACGAG AAGTTCTTGA AAGATATATG TTACGTCAAC ACCCGTGAGA GCTGCACTTC TGATGCGACG GATGAGATCT ACGCTGCTCT CTCGAGCATA CTTCCAGCAA CCAACAGATT GCCCGAGAAT TTGATCCTAG GATGCACTGT ATTTGGAGGT TTGGTTTCCA AGACAGATAC GCTCCAGAAC CGGATAAAAG TTGCCCATTT CTCAGCTTTG GTAGCAACAT TTGACTCGCT TATGCAGGCT TCTAGCTTGC TCTCGATGCC TGATGGTGGA GCTCGCGTGA AGGAAGACTG TGGCCTTTTC ATCCTCAAGC TCATCAGTCC TGCAACGTAC GAGAAACATT ATCACTCACG TGGACCTCTG CATCCTATTA AAATAGGATA CAGCAATTGA TCGACTGGCT GCAGACAGAT CAGAATCCTT TCTTACCGTT GCACCCTCGA CTTCACATGA CGTGCGTCAC AGTAGTCGTG CGCTTCGTGG AAGTGTGTCT ACTGGAGCAC GAGTTGACGG AGAGTGGGTT TCAGATCGAG CCTGAAATGC AGGGCTTTCC TCAACATGTA CGAGAAAAAT CTGGCATTGC CGAAGCGTAC ACTCTTATGG TCCTCGTTGC GCCTCATCTA GTTCCACAGA ACTATTCTTC CGAAGATGGA AAGGCGGACC ACTCTTTCTT TTACAACAAG ATATATCCAC TGATCCCTGA GATAAATGCT GCCGTCGACA AAATCAACGA CATTTTGTCC TATTACAAGG AGTTCGAGGA CGAAGATGAA TGTATGGCCT ACATTAGCAG CACGGCGAAA CTGAAGCAAA TCACCACATA CGAGGTTCTC GATGATCTGA TGGACGAAAT GGTGGAGACC CGGAAAAACT GCATGGCGAT AGCAGAGAGG AGCGGGTCTC GGGAGGTGGT GGCGACTGTA GCTGCGTTCT TTCAGGGATA TATATCGTTT CACTTCACCT GGAACTCACG TTATAAACTT AGAGAGCTAT TCGGTGACGA CTGGTTCGCG GGTGACTGTG TGTAGATCGT AAGTAGGATA AGTGTGTAAG TAGATGATCA CGAACAACTC ATCATCTACT TACATAGAAG AAAATAAAAT CATTTGTTGT AGTTTTCAGG TGTGGATGCC AAGCACCTGC CACTTCTTTG TACGTACAAT GGAGTACACA ATTTATACCA GGTTCTCGTA CCATGATGGT CAGAAAGCGA AGTGATGTCT CCTCTGTGAC ACGATTGGC |
CDS |
| >Mp1g25500.1 ATGACGTGCG TCACAGTAGT CGTGCGCTTC GTGGAAGTGT GTCTACTGGA GCACGAGTTG ACGGAGAGTG GGTTTCAGAT CGAGCCTGAA ATGCAGGGCT TTCCTCAACA TGTACGAGAA AAATCTGGCA TTGCCGAAGC GTACACTCTT ATGGTCCTCG TTGCGCCTCA TCTAGTTCCA CAGAACTATT CTTCCGAAGA TGGAAAGGCG GACCACTCTT TCTTTTACAA CAAGATATAT CCACTGATCC CTGAGATAAA TGCTGCCGTC GACAAAATCA ACGACATTTT GTCCTATTAC AAGGAGTTCG AGGACGAAGA TGAATGTATG GCCTACATTA GCAGCACGGC GAAACTGAAG CAAATCACCA CATACGAGGT TCTCGATGAT CTGATGGACG AAATGGTGGA GACCCGGAAA AACTGCATGG CGATAGCAGA GAGGAGCGGG TCTCGGGAGG TGGTGGCGAC TGTAGCTGCG TTCTTTCAGG GATATATATC GTTTCACTTC ACCTGGAACT CACGTTATAA ACTTAGAGAG CTATTCGGTG ACGACTGGTT CGCGGGTGAC TGTGTGTAG |
Protein |
| >Mp1g25500.1 MTCVTVVVRF VEVCLLEHEL TESGFQIEPE MQGFPQHVRE KSGIAEAYTL MVLVAPHLVP QNYSSEDGKA DHSFFYNKIY PLIPEINAAV DKINDILSYY KEFEDEDECM AYISSTAKLK QITTYEVLDD LMDEMVETRK NCMAIAERSG SREVVATVAA FFQGYISFHF TWNSRYKLRE LFGDDWFAGD CV |