Mp1g26880
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:2.40.40.10 | - |
| PRINTS | PR01225 | Expansin/Lol pI family signature |
| PRINTS | PR01226 | Expansin signature |
| ProSiteProfiles | PS50842 | Expansin, family-45 endoglucanase-like domain profile. |
| SUPERFAMILY | SSF50685 | Barwin-like endoglucanases |
| SMART | SM00837 | dpbb_1 |
| CDD | cd22274 | DPBB_EXPA_N |
| PANTHER | PTHR31867 | EXPANSIN-A15 |
| Pfam | PF03330 | Lytic transglycolase |
| KEGG | K20628 | expansin |
| MapolyID | Mapoly0002s0190 | - |
| GO | GO:0005576 | extracellular region |
| GO | GO:0009664 | plant-type cell wall organization |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpExpansin9 | Cell wall related protein | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp1g26880 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g26880.1 GTTCCTCAAG GCTGTTTATA CCTGCACCGT CCCTGGACAG CGACTGCCTG CATTCTCGAC TCGTCTCCGA TTCTCTCTCG TCACTGTTAC CGTAGTCAGG AGCATTACGG GTGGTTTTGT CAGTTCCCAC GTCTCTTCAC TCCATCTGCC CATTTGGCTA CAATCGTGTA TAAATATCAA ACATGTCGAT GGCGATCTCA GTGTTCTGTC TGTCCTTCTA TGCTTTAGTT CATCTGGATG ACTGCAGTCA AGAGAGATTT CGAGTGTCTT CCTTTCTCTC CTCTTCTTGT GCAAAATAAA AATCCGAAAA TACACACTGT TGTTGCAATT TAATTGTCGC ACTCTCCTGC CTTCGACCTC ATCTTTCCCA TTGGAAATCA AGAGCCCAAC GCACAAACGT CGTAATTCGT TGCTGGAAGT TGTCCACATG TACTTGTGGA TCAACATCTT GCTCAAGTTG CAGAACAATG TCCACTGAAA ATGTATGAAT TCAGCAAAAC ATATGTAGGA CTCTAGTGAA GCTTTGGCTC GTTTCGACGC TGGATAGTAA GCTCCTTGCT TTTTCAGGAG TGATGAAGAC TCTACTGCTT ACTCTACTCG TTGTTGGACA TCTGCATGGA GCACTTGGTA TATACTGGGG ATGGAGCCCA GCTCATGCAA CCTTTTATGG CGGAAGCGAT GCACAAGGAA CTCAAGGTAT CGTGTGATAC AATCTGAAAC TAGTATAGGC GCCAATTGAA CAGCTAACCA CCATCTTTCC GCATCGAGGT TTTATTTTGC TCTTGTTAGT ATGACAAAGA CGAAGGTAGG ATGTAGCTCG GCAAAGTATC AATTGTTCTT ACACCTCGAA CGGCACGTAA TCTGCCAGGA GGTGCTTGTG GTTATGGTAA TCTATATCGA ATTGGCTACG GCATCAACAC AGCTGCTTTG AGTACAGCAT TATTTGCTAA TGGACTCTCT TGTGGAGCCT GCTTCGAACT CAAGTGCAAT TCACCGAGAT GGTGTAAATC TGGAAGAAAT CCTATCAGGA TAACAGCAAC CAATTTGTGC CCTCAGAACC ATGCTCATCC CAACAATGCC GGTGGCTGGT GCAACATGCC CTTACAGCAT TTTGACATGG CCCAGCCTGC CTACGAGCAG ATTGCCATTT ATCGTGCCGG GATAGTTCCC GTTATGTACA GAAGGTACTT TTACCGCTGC TAATGAACCC GTCTTATTGT TGTCTGCAGT TATTTCCCCT CCGAGAGGTG AATATTAATC CTTCGTCCGA AGGTCTGAGA ACCCTTGAAA TCAAGGCCAG TTATGAAGAC TTTCATGTAC AAACCGCATT GGGGTCCTTT GTTTGTTTCA GCTTGTTAAT TACTAGCAGA TCTAGATCAC ATAGAGACCT TTGGTGGCGT GTGTTCAGAC AGACCTTAAA TGATTGAACA ACAGAAGTGC AGATAATTGT CATCAGAGCA GTATACTATT GGATTTGGAC CAGCTTGGTG AGGTCCTTCT GTGATACTTT TGTGCGATAA TTTCCCAAGC AATGTGTTTC AGTATTTTGA CTCGAGAAAC TGATGTAGAC TACAAAACCG ATTCGTTTTT CGCAAATGGT TCAGAGTGCA GTGCATAAAA TTTGGTGGCA TCCATTTCAC GATGAATGGG AACCGTTGGG AGGTCCTAGT TCTTCTCACG AATGTAGGAG GAGCTGGTAA TGTACATGCA GTTTCTGTGA AGGGTCCACA TACGAACTGG TTGTACATGC GGAGGAACTG GGGTCAGAAC TGGCAAATCA ATGACAAACA GCTTGCAGGG GCCACTTTAT CTTTCCGAGT CACAACTGAA GATGGGCGTG TTGTCACGTC CTGGGACGTC GTACCTCATT ACTGGCGTTT TGGTCAAACT TTTGAAGGTT TAAACTTCTA GGTTATTTGT TTTATCGCCG GGTCTCGTAT ACCGTAGAGC CAACAGTATC CATGCAACTT TATAGACTTC TCGTTACTGA CAGTTTACGT GAAACTTTCT TTCAAACGGG CCCCATATTC CAGGAGGCCC GGTGTCAACC GAAGTTTAGC TATGACAAAC TTGACACTGA TTTTTGAAAA CTTGTCATAT TATCCTTGAT ATTCTCCTGT TGCAGATACT TTGTGCTGTA CTGTCG |
mRNA UTR + CDS |
| >Mp1g26880.1 GTTCCTCAAG GCTGTTTATA CCTGCACCGT CCCTGGACAG CGACTGCCTG CATTCTCGAC TCGTCTCCGA TTCTCTCTCG TCACTGTTAC CGTAGTCAGG AGCATTACGG GTGGTTTTGT CAGTTCCCAC GTCTCTTCAC TCCATCTGCC CATTTGGCTA CAATCGTGTA TAAATATCAA ACATGTCGAT GGCGATCTCA GTGTTCTGTC TGTCCTTCTA TGCTTTAGTT CATCTGGATG ACTGCAGTCA AGAGAGATTT CGAGTGTCTT CCTTTCTCTC CTCTTCTTGT GCAAAATAAA AATCCGAAAA TACACACTGT TGTTGCAATT TAATTGTCGC ACTCTCCTGC CTTCGACCTC ATCTTTCCCA TTGGAAATCA AGAGCCCAAC GCACAAACGT CGTAATTCGT TGCTGGAAGT TGTCCACATG TACTTGTGGA TCAACATCTT GCTCAAGTTG CAGAACAATG TCCACTGAAA ATGTATGAAT TCAGCAAAAC ATATGTAGGA CTCTAGTGAA GCTTTGGCTC GTTTCGACGC TGGATAGTAA GCTCCTTGCT TTTTCAGGAG TGATGAAGAC TCTACTGCTT ACTCTACTCG TTGTTGGACA TCTGCATGGA GCACTTGGTA TATACTGGGG ATGGAGCCCA GCTCATGCAA CCTTTTATGG CGGAAGCGAT GCACAAGGAA CTCAAGGAGG TGCTTGTGGT TATGGTAATC TATATCGAAT TGGCTACGGC ATCAACACAG CTGCTTTGAG TACAGCATTA TTTGCTAATG GACTCTCTTG TGGAGCCTGC TTCGAACTCA AGTGCAATTC ACCGAGATGG TGTAAATCTG GAAGAAATCC TATCAGGATA ACAGCAACCA ATTTGTGCCC TCAGAACCAT GCTCATCCCA ACAATGCCGG TGGCTGGTGC AACATGCCCT TACAGCATTT TGACATGGCC CAGCCTGCCT ACGAGCAGAT TGCCATTTAT CGTGCCGGGA TAGTTCCCGT TATGTACAGA AGGTACTTTT ACCGCTGCTA ATGAACCCGT CTTATTGTTG TCTGCAGTTA TTTCCCCTCC GAGAGGTGAA TATTAATCCT TCGTCCGAAG GTCTGAGAAC CCTTGAAATC AAGGCCAGTT ATGAAGACTT TCATGTACAA ACCGCATTGG GGTCCTTTGT TTGTTTCAGC TTGTTAATTA CTAGCAGATC TAGATCACAT AGAGACCTTT GGTGGCGTGT GTTCAGACAG ACCTTAAATG ATTGAACAAC AGAAGTGCAG ATAATTGTCA TCAGAGCAGT ATACTATTGG ATTTGGACCA GCTTGGTGAG GTCCTTCTGT GATACTTTTG TGCGATAATT TCCCAAGCAA TGTGTTTCAG TATTTTGACT CGAGAAACTG ATGTAGACTA CAAAACCGAT TCGTTTTTCG CAAATGGTTC AGAGTGCAGT GCATAAAATT TGGTGGCATC CATTTCACGA TGAATGGGAA CCGTTGGGAG GTCCTAGTTC TTCTCACGAA TGTAGGAGGA GCTGGTAATG TACATGCAGT TTCTGTGAAG GGTCCACATA CGAACTGGTT GTACATGCGG AGGAACTGGG GTCAGAACTG GCAAATCAAT GACAAACAGC TTGCAGGGGC CACTTTATCT TTCCGAGTCA CAACTGAAGA TGGGCGTGTT GTCACGTCCT GGGACGTCGT ACCTCATTAC TGGCGTTTTG GTCAAACTTT TGAAGGTTTA AACTTCTAGG TTATTTGTTT TATCGCCGGG TCTCGTATAC CGTAGAGCCA ACAGTATCCA TGCAACTTTA TAGACTTCTC GTTACTGACA GTTTACGTGA AACTTTCTTT CAAACGGGCC CCATATTCCA GGAGGCCCGG TGTCAACCGA AGTTTAGCTA TGACAAACTT GACACTGATT TTTGAAAACT TGTCATATTA TCCTTGATAT TCTCCTGTTG CAGATACTTT GTGCTGTACT GTCG |
CDS |
| >Mp1g26880.1 ATGAAGACTC TACTGCTTAC TCTACTCGTT GTTGGACATC TGCATGGAGC ACTTGGTATA TACTGGGGAT GGAGCCCAGC TCATGCAACC TTTTATGGCG GAAGCGATGC ACAAGGAACT CAAGGAGGTG CTTGTGGTTA TGGTAATCTA TATCGAATTG GCTACGGCAT CAACACAGCT GCTTTGAGTA CAGCATTATT TGCTAATGGA CTCTCTTGTG GAGCCTGCTT CGAACTCAAG TGCAATTCAC CGAGATGGTG TAAATCTGGA AGAAATCCTA TCAGGATAAC AGCAACCAAT TTGTGCCCTC AGAACCATGC TCATCCCAAC AATGCCGGTG GCTGGTGCAA CATGCCCTTA CAGCATTTTG ACATGGCCCA GCCTGCCTAC GAGCAGATTG CCATTTATCG TGCCGGGATA GTTCCCGTTA TGTACAGAAG GTACTTTTAC CGCTGCTAA |
Protein |
| >Mp1g26880.1 MKTLLLTLLV VGHLHGALGI YWGWSPAHAT FYGGSDAQGT QGGACGYGNL YRIGYGINTA ALSTALFANG LSCGACFELK CNSPRWCKSG RNPIRITATN LCPQNHAHPN NAGGWCNMPL QHFDMAQPAY EQIAIYRAGI VPVMYRRYFY RC |