Mp1g27170



Description

Annotation

Database ID Description
KEGG K10664 E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27]
KOG KOG4628 Predicted E3 ubiquitin ligase; N-term missing; [O]
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF57850 RING/U-box
SMART SM00184 ring_2
Pfam PF13639 Ring finger domain
ProSiteProfiles PS50089 Zinc finger RING-type profile.
PANTHER PTHR14155:SF263 E3 UBIQUITIN-PROTEIN LIGASE ATL6
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain
CDD cd16461 RING-H2_EL5_like
PANTHER PTHR14155 RING FINGER DOMAIN-CONTAINING
MapolyID Mapoly0002s0161 -

Nomenclature

Gene symbol Product Transcript ID Status
MpACRE132 PAMP-responsive gene Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g27170.1 chr1:27562764..27567989 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.