Mp1g27660
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:1.10.20.10 | Histone, subunit A |
| PANTHER | PTHR23428 | HISTONE H2B |
| SMART | SM00427 | h2b3 |
| Pfam | PF00125 | Core histone H2A/H2B/H3/H4 |
| PRINTS | PR00621 | Histone H2B signature |
| FunFam | G3DSA:1.10.20.10:FF:000016 | Histone H2B |
| SUPERFAMILY | SSF47113 | Histone-fold |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| KEGG | K11252 | histone H2B |
| KOG | KOG1744 | Histone H2B; N-term missing; [B] |
| MapolyID | Mapoly0002s0112 | - |
| GO | GO:0030527 | structural constituent of chromatin |
| GO | GO:0000786 | nucleosome |
| GO | GO:0046982 | protein heterodimerization activity |
| GO | GO:0003677 | DNA binding |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpH2B.5 | Chromatin related protein | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp1g27660 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g27660.1 GTTTCTTATT GGCCCAGTCA CGCCATGCAG TGCGTATAAG TGCCATTCAG AGAGATCGGG CTTTCATTCT AATTTCTCGA AGCTTGTGGC CTTTGGGAAG CCTTCACGGA TTGGAAAGAT TTGCTTTCAA GACAATCGAC AATCATGAAA GTGAAATCCG AATCCTCGGT CGATCAGAAG AAACCAGTTA CAACTGCAGC TACGAAGATT GCAATTAGTG ATGATGATGA GGATGATGAT GATACCAAGG TTGTTGAGCT GGAGGAGAAG ACGAAGAAAC AAAGCCGGCC GAAGAAATCG ATGAAGAATC TGGTCCTTAA ATCCAAAGGA AAGAGCAAGA GAAAGAGCGA TAATAGCACT CAGTCTACTG CCAATACGGA CGGTGTCAAG AAGAGGAGGA AACCGAAGAA GTCTGTTGAG AGTTACCGGA TTTACATCTA CAAAGTTCTG AAGCAGGTCC ATCCGGAATT TGGAATCTCC TCCAAGGCCA TGAGTATTAT GAACTCTTTC TTGAATGATA TATTTGAAAG ACTTGCTTCG GAGGCAGTCA GATTGTCACG ATACAGCAAG AAACCCACGG TCGCTTCACG TGAGATTCAA ACTGCAGTTC GACTCACCTT TCCTGGTGAG TTGGCGAAGC ATGCAATTGC AGAAGGTACC AAAGCTGTGG GGAAATTCAC TACTTTGATT AAATCTTCTT GACAGTGTGA CAATAGTTTC TTGGAGTTGG GATTCAAACT GCAGTTCGAC TCACCTTTCC CGGTGAGCTG GCCAAGCATG CAGTTGCAGA AGGTACCAAA GCTGTGGGGA AATTCACTAC TTTGATTAAA TCTTCTTGAC AGTGTCACAA TAGTTTCTTG GAGTTGGGAT TCAAACTGCA GTTCGACTCA CCTTTCCCGG GGAGCTGGCC AAGCATGCAG TTGCAGAAGG TACCAAAGCT GTGGGGAAAT TCACTACTTT GATTAAATCT TCTTGACAGT GTCACAATAG TTTCTTGGAG CTCATGTTTG CGAGCTGCCA AATTGTGGAC TTCAACGAGA GACTGGAGCT CGATAACGCC ATAAAGTAGT CTTCTAAATC TTCTATACAT TTTGGTATGA CAGATAAGAT GAGAGTAGAG TGCTGTTTCC AGGAAGGGGA AACAACATCA AATCTTGTAT GTAATAAAAC TAGATGCGTC AGGTGGATGT CAATGGCATA GTGAATCAAA TCGATGCATA GTCTTGAAAA TCTGGCATAA ACCTCGTCAA TGGAGTCTGC GATTTAATAA TATTCCGGTG TGTCTTCTTT ACAACAAGTT CAGAATTTGT GGCAATCATG AATTTGTATC AAGCTATGAT GAACTGAAGG GAAGAGTAAC AAGTCTCTCT GATGTTTCAT TCAGAAGTGA TACACTCATC CCTTCACGGC TTTGGATACA GTTGATACAT TATCACTGCT TCATGGAGGG AGAGAATCGA TGTGCAGATC TTGTTTTTTT AGTTCCATGG CTAAATGAAA GGAATGAAAA TATCG |
mRNA UTR + CDS |
| >Mp1g27660.1 GTTTCTTATT GGCCCAGTCA CGCCATGCAG TGCGTATAAG TGCCATTCAG AGAGATCGGG CTTTCATTCT AATTTCTCGA AGCTTGTGGC CTTTGGGAAG CCTTCACGGA TTGGAAAGAT TTGCTTTCAA GACAATCGAC AATCATGAAA GTGAAATCCG AATCCTCGGT CGATCAGAAG AAACCAGTTA CAACTGCAGC TACGAAGATT GCAATTAGTG ATGATGATGA GGATGATGAT GATACCAAGG TTGTTGAGCT GGAGGAGAAG ACGAAGAAAC AAAGCCGGCC GAAGAAATCG ATGAAGAATC TGGTCCTTAA ATCCAAAGGA AAGAGCAAGA GAAAGAGCGA TAATAGCACT CAGTCTACTG CCAATACGGA CGGTGTCAAG AAGAGGAGGA AACCGAAGAA GTCTGTTGAG AGTTACCGGA TTTACATCTA CAAAGTTCTG AAGCAGGTCC ATCCGGAATT TGGAATCTCC TCCAAGGCCA TGAGTATTAT GAACTCTTTC TTGAATGATA TATTTGAAAG ACTTGCTTCG GAGGCAGTCA GATTGTCACG ATACAGCAAG AAACCCACGG TCGCTTCACG TGAGATTCAA ACTGCAGTTC GACTCACCTT TCCTGGTGAG TTGGCGAAGC ATGCAATTGC AGAAGGTACC AAAGCTGTGG GGAAATTCAC TACTTTGATT AAATCTTCTT GACAGTGTGA CAATAGTTTC TTGGAGTTGG GATTCAAACT GCAGTTCGAC TCACCTTTCC CGGTGAGCTG GCCAAGCATG CAGTTGCAGA AGGTACCAAA GCTGTGGGGA AATTCACTAC TTTGATTAAA TCTTCTTGAC AGTGTCACAA TAGTTTCTTG GAGTTGGGAT TCAAACTGCA GTTCGACTCA CCTTTCCCGG GGAGCTGGCC AAGCATGCAG TTGCAGAAGG TACCAAAGCT GTGGGGAAAT TCACTACTTT GATTAAATCT TCTTGACAGT GTCACAATAG TTTCTTGGAG CTCATGTTTG CGAGCTGCCA AATTGTGGAC TTCAACGAGA GACTGGAGCT CGATAACGCC ATAAAGTAGT CTTCTAAATC TTCTATACAT TTTGGTATGA CAGATAAGAT GAGAGTAGAG TGCTGTTTCC AGGAAGGGGA AACAACATCA AATCTTGTAT GTAATAAAAC TAGATGCGTC AGGTGGATGT CAATGGCATA GTGAATCAAA TCGATGCATA GTCTTGAAAA TCTGGCATAA ACCTCGTCAA TGGAGTCTGC GATTTAATAA TATTCCGGTG TGTCTTCTTT ACAACAAGTT CAGAATTTGT GGCAATCATG AATTTGTATC AAGCTATGAT GAACTGAAGG GAAGAGTAAC AAGTCTCTCT GATGTTTCAT TCAGAAGTGA TACACTCATC CCTTCACGGC TTTGGATACA GTTGATACAT TATCACTGCT TCATGGAGGG AGAGAATCGA TGTGCAGATC TTGTTTTTTT AGTTCCATGG CTAAATGAAA GGAATGAAAA TATCG |
CDS |
| >Mp1g27660.1 ATGAAAGTGA AATCCGAATC CTCGGTCGAT CAGAAGAAAC CAGTTACAAC TGCAGCTACG AAGATTGCAA TTAGTGATGA TGATGAGGAT GATGATGATA CCAAGGTTGT TGAGCTGGAG GAGAAGACGA AGAAACAAAG CCGGCCGAAG AAATCGATGA AGAATCTGGT CCTTAAATCC AAAGGAAAGA GCAAGAGAAA GAGCGATAAT AGCACTCAGT CTACTGCCAA TACGGACGGT GTCAAGAAGA GGAGGAAACC GAAGAAGTCT GTTGAGAGTT ACCGGATTTA CATCTACAAA GTTCTGAAGC AGGTCCATCC GGAATTTGGA ATCTCCTCCA AGGCCATGAG TATTATGAAC TCTTTCTTGA ATGATATATT TGAAAGACTT GCTTCGGAGG CAGTCAGATT GTCACGATAC AGCAAGAAAC CCACGGTCGC TTCACGTGAG ATTCAAACTG CAGTTCGACT CACCTTTCCT GGTGAGTTGG CGAAGCATGC AATTGCAGAA GGTACCAAAG CTGTGGGGAA ATTCACTACT TTGATTAAAT CTTCTTGA |
Protein |
| >Mp1g27660.1 MKVKSESSVD QKKPVTTAAT KIAISDDDED DDDTKVVELE EKTKKQSRPK KSMKNLVLKS KGKSKRKSDN STQSTANTDG VKKRRKPKKS VESYRIYIYK VLKQVHPEFG ISSKAMSIMN SFLNDIFERL ASEAVRLSRY SKKPTVASRE IQTAVRLTFP GELAKHAIAE GTKAVGKFTT LIKSS |