Mp1g29640



Description

Annotation

Database ID Description
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CDD cd17546 REC_hyHK_CKI1_RcsC-like
CDD cd00082 HisKA
Gene3D G3DSA:3.30.565.10 -
Gene3D G3DSA:3.30.450.20 PAS domain
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase
SMART SM00387 HKATPase_4
ProSiteProfiles PS50109 Histidine kinase domain profile.
Gene3D G3DSA:3.40.50.2300 -
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ProSiteProfiles PS50110 Response regulatory domain profile.
SMART SM00388 HisKA_10
FunFam G3DSA:3.30.450.20:FF:000061 Histidine kinase 5
Pfam PF00072 Response regulator receiver domain
FunFam G3DSA:3.40.50.2300:FF:000201 Histidine kinase 5
FunFam G3DSA:1.10.287.130:FF:000030 Putative histidine kinase 5
Coils Coil Coil
PRINTS PR00344 Bacterial sensor protein C-terminal signature
SMART SM00448 REC_2
Gene3D G3DSA:1.10.287.130 -
Pfam PF00512 His Kinase A (phospho-acceptor) domain
PANTHER PTHR43047 TWO-COMPONENT HISTIDINE PROTEIN KINASE
SUPERFAMILY SSF52172 CheY-like
KOG KOG0519 Sensory transduction histidine kinase; [T]
MapolyID Mapoly0139s0010 -
GO GO:0046777 protein autophosphorylation
GO GO:0009927 histidine phosphotransfer kinase activity
GO GO:0016772 transferase activity, transferring phosphorus-containing groups
GO GO:0000155 phosphorelay sensor kinase activity
GO GO:0000160 phosphorelay signal transduction system
GO GO:0005887 plasma membrane
GO GO:0016310 phosphorylation
GO GO:0007165 signal transduction

Nomenclature

Gene symbol Product Transcript ID Status
MpPAS1 Histidine-kinases Provisional

Transcript models

Transcript ID Location Sequences Extract region
Mp1g29640.1 chr1:31371752..31386431 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp1g29640 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp1g29640 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.