Mp2g00260



Description

Annotation

Database ID Description
KOG KOG0553 TPR repeat-containing protein; C-term missing; [R]
KOG KOG2084 Predicted histone tail methylase containing SET domain; N-term missing; C-term missing; [B]
ProSiteProfiles PS50005 TPR repeat profile.
SUPERFAMILY SSF82199 SET domain
Gene3D G3DSA:1.25.40.10 -
SMART SM00028 tpr_5
SMART SM00317 set_7
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR47643 TPR DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_5G12710)
Gene3D G3DSA:2.170.270.10 SET domain
ProSiteProfiles PS50280 SET domain profile.
SUPERFAMILY SSF48452 TPR-like
CDD cd20071 SET_SMYD
ProSiteProfiles PS50293 TPR repeat region circular profile.
Pfam PF00856 SET domain
MapolyID Mapoly0028s0125 -

Nomenclature

Gene symbol Product Transcript ID Status
MpATXR13 Chromatin related protein Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g00260.1 chr2:301040..307124 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g00260.2 chr2:301040..307116 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.