Mp2g00510
Description
Annotation
| Database | ID | Description |
|---|---|---|
| PANTHER | PTHR31945 | TRANSCRIPTION FACTOR SCREAM2-RELATED |
| SUPERFAMILY | SSF55021 | ACT-like |
| CDD | cd11443 | bHLH_AtAMS_like |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain |
| SMART | SM00353 | finulus |
| Gene3D | G3DSA:4.10.280.10 | - |
| Coils | Coil | Coil |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. |
| KOG | KOG1318 | Helix loop helix transcription factor EB; N-term missing; C-term missing; [K] |
| MapolyID | Mapoly0028s0100 | - |
| GO | GO:0043565 | sequence-specific DNA binding |
| GO | GO:0005634 | nucleus |
| GO | GO:0003700 | DNA-binding transcription factor activity |
| GO | GO:0046983 | protein dimerization activity |
| GO | GO:0006355 | regulation of DNA-templated transcription |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpBHLH48 | transcription factor, bHLH | Published | |
| MpFIT1 | transcription factor, bHLH | Provisional |
Associated Literature (AI-based literature mining, Beta-version)
transcription factor, bHLH (from nomenclature)
0 core 1 peripheral
Lo, J. C., et al. (2016)
· New Phytologist research experimental background
MpFIT1 FIT-like bHLH; Fe uptake regulation
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp2g00510 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp2g00510.1 CCCGCCGACG GCTGGTGGCA AGGCATTGGT GCCACAGAAA GGAAAGTCTC TCGTGGGTCT GGATTTGTAT TGGCACCGGC GACCGCGGAC CATCAGGCCA GGGGATGAAC CATTAGTACC GCTGTGCTAT TATGTTACTG TTGGGATTTG TTTAAGCGTT TTCTGCTTCG GTGGCATTGC GCCATTGCGC CCATGCTTTC CTCTCCTTTC GGGTCTGGAA TGGGATCTCT CCTCTCGCGT CTCGACTCTG TCACCGTGCG CGAAAAGAAC ACCGCGAGAA AATCACGCCC ATACAAGAGG AGCCAGGAGT AATTGGTTCG CATCAGGACC GAGAATCCGG AGTGAGCTCC AGCCTCTAGG CGCAGCGGGC TGCTTGCGAT CCTTGCGAGT AGGGCAGCGG GGCAGGAACC GACGCCATCA GTCTTCAGCT CCGACGTTCT GATTTGTTGG TGTTGCTGCG ACGGAGAGAG TGGCAGCGAG AGGAACGATA GACTTACGAT GGCTTCTCGT TGTTGTGTCC TGTCCTGTGC TTGCGGAATC GCCGTCTCCT TTTACGAGTC TCCTCTCCTG ATGATCTTTG CCGGCAGCCC CGTTTGACTA ACATTCTGGA TCAGCTCAGT GGTGCCGAGG GCTAAATTGC CGTGGCAACT CTGAGTGGTG TAATTTTAGC TCTGTGGATG TCACGTACCT CCTAAATTAC AAGAAGGCGA TTTTTGAGAA AAGACGGGGA GTGGGAGAGG GAAGGAGGCG CCAAGCAGTT GCTCGGTTTG TGTCGGTGTT TTGTCGGAGG GTTCTCGTGA CTGAGTGGTG AAGCGCTTTT TTGATGGACA AAAAGCCTCT TATTATCCCT GGCGATAATC GACTCGACTC GTCACAGAAT TTGCATCACT CTGTGCTCGT CGGAGCGGCG CATGAAATGT TTCAAAGTGG TCATGGTCTT GGGACTTCTT CAAACATGAC TCCGGGCTCC ATGTGCAATC TTCACCCTCC TTTGAGCTCT TTTGGTGCAG AGTCCAACTT ACACGAGCTG CTCGCACACG CCAGTCCTCA TGCTGGTTCT CATGCGCAAT CTCTGAACCA CTCTTCGAAT CACCCTGCAG ACTTTTTGGC CACTCTGGGT GATGGAGTGT TGGGTGAATC CAGTGACAAT CATATGTTCC ACAGGCAGAT GGAGTTTTCA AAGCAAAAAT GGACGACCCC TTCCAAGCTC ACGCCGGGTC CCTTCTGGAT GCTGCCGCAC CATCTCGATC CAGCAAACTA CCCTCTTCCC GGACTTGCTG TCAGCGGCAC GAGCTCCCCA AAGACCAATG TTGGCCCTTC TGCTGGCGAG GACTCCTCTA ACCCGAACAG ACAGGTGTGG TGTGAAAGGG GTGCGAATCA AGTTCTAATG AAATCAGAGG ATAATGTGGC TACTCTGAAG CTTCCGATGG TCGTCAAACC CGACAGGTCG CTGCTTTGTG ATGGCTCCGG GGCTCCCGTG GATTCACCCA AAGGAGCGAA TGGCAATCTG ATCAACAGGG ATACCTCTGA TATGGATGCC AAGCAGCTAG ATTCCTCCGA TTGCAGTGAT CATAACATGG ATGAACAGGA GGAGAAGGAT CAAGCAACAC GAAACGGAGC CGGAAGGACG GTGTCCAAAA ATCTAGTCTC TGAGCGGAAA CGAAGAAAAA AACTCAATGA TGGTCTTTAC ACTCTGCGTG CCCTTGTTCC GAAAATTAGC AAGGTTCTCT TCTGTCCTCT TTGCTCCTGA TGCGTTTTTG TGATAGTTTC CTCTTCTAAG GGCTATGCAC TGACTTCCTG TAACAATCGA GATGGAGATG ATATGTCGTC TCCTGTGGCC CAACGGATGC TTATGTCTTT GGTAGCGCAA CGGCTCTCAC ACTGAGCCTC ATCGTTGTAA AAGTAGAAAC TAGACTTGTT TCAGTACTAA ACAAATTCTG AGCTTCCAAA AATTCGTTTC CTAAATTTTC TAAATTTCAC AGTTCAGATT ACCAGTAGTC ACTATGGATA ATAAATGACC CCCTCAGATG TGGTTCGTTC AATCTTTCAA GGAAACATGC TTAGAAGTTT CCATTTGCCT TTGTTTAGTT AGTCATTTGC TTTTATGGGA TGTCATATGT CGAAAACTTG CGGTGAATCT CTAGAAGAGT TGTTTACTAC TTGTGGAAGT CAGAACTTGT TGTAGATGGT GTAAAGTTTC TACCATGTTT TCTTATTGTT TGTTAGAACT CATGTTGTCC ACCAGTCATA AAATAAGAAA GTTTTCACCC AAAACTTCAT TTGTCTGCAT CAACTTCAGC CTTGTTCCCC AGTACCCAAA GTTCGTCACC ATATTAGGAT TTAGAGATAC AGCATTCTCA TCACTCTTTA GCTCATTTCT CATTACCTTT ATGGTCAGTC CGATTATCGT GGCGTCAATA ATATACAGTG AGTACTTGTC TTTAGTCTCC AATTCGTTCT TGTTATCAAT CTTGCTGAGC TGGATTTCTG GCATTTGCAG ATGGACAAGG CATCAATTGT GGGTGATGCT ATTGACTATG TGCGCGAGTT ACAAAAGCAG GTTGAAGAGT TGCAGGCTGA TATATCTGAC ATTGAATCAA CCAAGCCTAC AACCGGACCT GGAGGTGAAG CGTCATTATC ATCTGTGGCA GAGCCAAGTA CGGCTCAGGG TTCCACAGCT CCATCCAGCG GTCGTTCTTG GGAGGAAGAA GGCCACAGAA CGTCTGAGGG TCAGCCTCGT CAAGAAATGA GCGAAGCTCC GTTTGAGGAT ACAACAGAAC AGAAAATTCT CGAGGTAATT GTTATCTGTC AATACCATGA AAGTGATTCT CTATGCTCAG CTCGATGCAA ATGCAATTAC CGGGAGGCAT TTGCATATGC AAATGTCTCC TCGTCTTTAG TAAATTGCCT AACTACATGC ATGTGCATAT ACGGTCTTCG GAGACGTATT ACTTTATTTT GTACTTCATT TTTTCACCCG AAAATACTCT TCGTGTATGA CTTGCATTAC TAACCTTATA GATCCGTTTC ACATCCAGAC GTGAATGTTG GTAAAAGCAT TTGCATATGC ATTAAGGTCC ATCCAATAGT CTTTTTCTTT CTCCGTTTAT GTGCCTGCGT TCCCATTACT TAAAAACCGG AACGTGCTCC AAGTGATCTA TGTTTGTCCT GTTTCTGAAG TTTATGATCA TCCCAAATTT ACAATTTGAC ATGCGGTGCT TGTGAAATGT AACCCGATTC ATCATGAATA GGAAGCTTAG TGTTATACAT CTAAGTGCTT GTTTCAGAAA CTGTGGTGGG TCTTAAACTG CCTTATTGCT AACCCTTGTC AAACCACTAA GCAAATAGAA CAATACCTAC TTGCATGACT GACATACCAT CCTACTCCTC TGTCCTCATA CTTTTCCTTG GAGGTCTGGT TTTTGATTAT CATTGAATTG TGCAGGAGGT CTATGCTTCA GTCTATCCAT TACCTATTGC AATTGGATAT ATGTTTTGGA GCTTTGGACA ACTTTTTAAA CAGGACTGTT TTTGCACAAT TCTCTTCGTG ATGAAGATAA TATGTAAACT TACTTTGAAT ATAACGCTGA CAAAGTCTGC TCTTTGGAGC ACACAACACG ACAAGTTCTT CCCTCACCAG GTAACCAACT TTGGTATGTG AAAGATCTCA GTACATTTAC CAGTACTGAT TCTGACACAC CATTGGTTAC AGTTGGATGT TGCGAAGATG GAAGAGCAGA TCTATCATCT CCGAATCTTT TGTACCAAAG GACCCGGTGT ATTTGTGCAA TTGATGCAAT CTTTGGAGGC CTTGGGTCTT GAAATACGCA ATGCCAATCT GACATCATTC CAAGAAAATT TACTGAACAC CTTCATTGCA GAGGTAAGTA AACGTTCATT CAACGCTATA AATATCTTGT TCCTGTATTT TGTTGTCAGT TAGTAGGTAC TATTCTTTAG TGCTTATCTC ATGTTTGCCT TCTTACAGAT CAAAGACTGG GAGATGATGA AGACCGAAGA GGTTAAGAAG GCCATTCTGG ATGTGGCTGC TCGTTTTGGT CTGCAACCTT AAGTTTATAC AGAGATGAGC AGCTTTGCCA ACCATATTTC TTCATCACTC CTTTTACGGC CCGTGTGATT GAGATATCTG TCACTTGAGT TTCAAATCCC AGATCAGGCT TCAGCTAGCA TAGATACTTG GCGAAGAAAA GTGGAGGGAG TCCATTTGGA GCTGCAAGAA AGTAGTCAAC ATTAAAGCAA GTCGATCAAA TACTTACATA AAACATTCCA AGTAAAGTGG AGGAAGAAGC TGGAATTGCA TCCGGTTCTG TATATAGTTA TCCCTTTTTG ATAAACTCCC ACTCCACCCT TGAGATAGAA GCAAGTCGAT AGTCCGGGTG TATCTTGGAA CGTTGTTAGT GAGATTCAAT ATTCTTCCAT ACTACTGTAG TAGTATTTTT TAGAAACATC TCTTCTATGT CAGGAACATT GGTTGAGGCA CCTCCACTTG TTTCTACTTC GGGTGAAATA ACACGCATTC AAGTGCTTAA ATGTGCACGT TCCTTTGCCA AGGTT |
mRNA UTR + CDS |
| >Mp2g00510.1 CCCGCCGACG GCTGGTGGCA AGGCATTGGT GCCACAGAAA GGAAAGTCTC TCGTGGGTCT GGATTTGTAT TGGCACCGGC GACCGCGGAC CATCAGGCCA GGGGATGAAC CATTAGTACC GCTGTGCTAT TATGTTACTG TTGGGATTTG TTTAAGCGTT TTCTGCTTCG GTGGCATTGC GCCATTGCGC CCATGCTTTC CTCTCCTTTC GGGTCTGGAA TGGGATCTCT CCTCTCGCGT CTCGACTCTG TCACCGTGCG CGAAAAGAAC ACCGCGAGAA AATCACGCCC ATACAAGAGG AGCCAGGAGT AATTGGTTCG CATCAGGACC GAGAATCCGG AGTGAGCTCC AGCCTCTAGG CGCAGCGGGC TGCTTGCGAT CCTTGCGAGT AGGGCAGCGG GGCAGGAACC GACGCCATCA GTCTTCAGCT CCGACGTTCT GATTTGTTGG TGTTGCTGCG ACGGAGAGAG TGGCAGCGAG AGGAACGATA GACTTACGAT GGCTTCTCGT TGTTGTGTCC TGTCCTGTGC TTGCGGAATC GCCGTCTCCT TTTACGAGTC TCCTCTCCTG ATGATCTTTG CCGGCAGCCC CGTTTGACTA ACATTCTGGA TCAGCTCAGT GGTGCCGAGG GCTAAATTGC CGTGGCAACT CTGAGTGGTG TAATTTTAGC TCTGTGGATG TCACGTACCT CCTAAATTAC AAGAAGGCGA TTTTTGAGAA AAGACGGGGA GTGGGAGAGG GAAGGAGGCG CCAAGCAGTT GCTCGGTTTG TGTCGGTGTT TTGTCGGAGG GTTCTCGTGA CTGAGTGGTG AAGCGCTTTT TTGATGGACA AAAAGCCTCT TATTATCCCT GGCGATAATC GACTCGACTC GTCACAGAAT TTGCATCACT CTGTGCTCGT CGGAGCGGCG CATGAAATGT TTCAAAGTGG TCATGGTCTT GGGACTTCTT CAAACATGAC TCCGGGCTCC ATGTGCAATC TTCACCCTCC TTTGAGCTCT TTTGGTGCAG AGTCCAACTT ACACGAGCTG CTCGCACACG CCAGTCCTCA TGCTGGTTCT CATGCGCAAT CTCTGAACCA CTCTTCGAAT CACCCTGCAG ACTTTTTGGC CACTCTGGGT GATGGAGTGT TGGGTGAATC CAGTGACAAT CATATGTTCC ACAGGCAGAT GGAGTTTTCA AAGCAAAAAT GGACGACCCC TTCCAAGCTC ACGCCGGGTC CCTTCTGGAT GCTGCCGCAC CATCTCGATC CAGCAAACTA CCCTCTTCCC GGACTTGCTG TCAGCGGCAC GAGCTCCCCA AAGACCAATG TTGGCCCTTC TGCTGGCGAG GACTCCTCTA ACCCGAACAG ACAGGTGTGG TGTGAAAGGG GTGCGAATCA AGTTCTAATG AAATCAGAGG ATAATGTGGC TACTCTGAAG CTTCCGATGG TCGTCAAACC CGACAGGTCG CTGCTTTGTG ATGGCTCCGG GGCTCCCGTG GATTCACCCA AAGGAGCGAA TGGCAATCTG ATCAACAGGG ATACCTCTGA TATGGATGCC AAGCAGCTAG ATTCCTCCGA TTGCAGTGAT CATAACATGG ATGAACAGGA GGAGAAGGAT CAAGCAACAC GAAACGGAGC CGGAAGGACG GTGTCCAAAA ATCTAGTCTC TGAGCGGAAA CGAAGAAAAA AACTCAATGA TGGTCTTTAC ACTCTGCGTG CCCTTGTTCC GAAAATTAGC AAGATGGACA AGGCATCAAT TGTGGGTGAT GCTATTGACT ATGTGCGCGA GTTACAAAAG CAGGTTGAAG AGTTGCAGGC TGATATATCT GACATTGAAT CAACCAAGCC TACAACCGGA CCTGGAGGTG AAGCGTCATT ATCATCTGTG GCAGAGCCAA GTACGGCTCA GGGTTCCACA GCTCCATCCA GCGGTCGTTC TTGGGAGGAA GAAGGCCACA GAACGTCTGA GGGTCAGCCT CGTCAAGAAA TGAGCGAAGC TCCGTTTGAG GATACAACAG AACAGAAAAT TCTCGAGTTG GATGTTGCGA AGATGGAAGA GCAGATCTAT CATCTCCGAA TCTTTTGTAC CAAAGGACCC GGTGTATTTG TGCAATTGAT GCAATCTTTG GAGGCCTTGG GTCTTGAAAT ACGCAATGCC AATCTGACAT CATTCCAAGA AAATTTACTG AACACCTTCA TTGCAGAGAT CAAAGACTGG GAGATGATGA AGACCGAAGA GGTTAAGAAG GCCATTCTGG ATGTGGCTGC TCGTTTTGGT CTGCAACCTT AAGTTTATAC AGAGATGAGC AGCTTTGCCA ACCATATTTC TTCATCACTC CTTTTACGGC CCGTGTGATT GAGATATCTG TCACTTGAGT TTCAAATCCC AGATCAGGCT TCAGCTAGCA TAGATACTTG GCGAAGAAAA GTGGAGGGAG TCCATTTGGA GCTGCAAGAA AGTAGTCAAC ATTAAAGCAA GTCGATCAAA TACTTACATA AAACATTCCA AGTAAAGTGG AGGAAGAAGC TGGAATTGCA TCCGGTTCTG TATATAGTTA TCCCTTTTTG ATAAACTCCC ACTCCACCCT TGAGATAGAA GCAAGTCGAT AGTCCGGGTG TATCTTGGAA CGTTGTTAGT GAGATTCAAT ATTCTTCCAT ACTACTGTAG TAGTATTTTT TAGAAACATC TCTTCTATGT CAGGAACATT GGTTGAGGCA CCTCCACTTG TTTCTACTTC GGGTGAAATA ACACGCATTC AAGTGCTTAA ATGTGCACGT TCCTTTGCCA AGGTT |
CDS |
| >Mp2g00510.1 ATGGACAAAA AGCCTCTTAT TATCCCTGGC GATAATCGAC TCGACTCGTC ACAGAATTTG CATCACTCTG TGCTCGTCGG AGCGGCGCAT GAAATGTTTC AAAGTGGTCA TGGTCTTGGG ACTTCTTCAA ACATGACTCC GGGCTCCATG TGCAATCTTC ACCCTCCTTT GAGCTCTTTT GGTGCAGAGT CCAACTTACA CGAGCTGCTC GCACACGCCA GTCCTCATGC TGGTTCTCAT GCGCAATCTC TGAACCACTC TTCGAATCAC CCTGCAGACT TTTTGGCCAC TCTGGGTGAT GGAGTGTTGG GTGAATCCAG TGACAATCAT ATGTTCCACA GGCAGATGGA GTTTTCAAAG CAAAAATGGA CGACCCCTTC CAAGCTCACG CCGGGTCCCT TCTGGATGCT GCCGCACCAT CTCGATCCAG CAAACTACCC TCTTCCCGGA CTTGCTGTCA GCGGCACGAG CTCCCCAAAG ACCAATGTTG GCCCTTCTGC TGGCGAGGAC TCCTCTAACC CGAACAGACA GGTGTGGTGT GAAAGGGGTG CGAATCAAGT TCTAATGAAA TCAGAGGATA ATGTGGCTAC TCTGAAGCTT CCGATGGTCG TCAAACCCGA CAGGTCGCTG CTTTGTGATG GCTCCGGGGC TCCCGTGGAT TCACCCAAAG GAGCGAATGG CAATCTGATC AACAGGGATA CCTCTGATAT GGATGCCAAG CAGCTAGATT CCTCCGATTG CAGTGATCAT AACATGGATG AACAGGAGGA GAAGGATCAA GCAACACGAA ACGGAGCCGG AAGGACGGTG TCCAAAAATC TAGTCTCTGA GCGGAAACGA AGAAAAAAAC TCAATGATGG TCTTTACACT CTGCGTGCCC TTGTTCCGAA AATTAGCAAG ATGGACAAGG CATCAATTGT GGGTGATGCT ATTGACTATG TGCGCGAGTT ACAAAAGCAG GTTGAAGAGT TGCAGGCTGA TATATCTGAC ATTGAATCAA CCAAGCCTAC AACCGGACCT GGAGGTGAAG CGTCATTATC ATCTGTGGCA GAGCCAAGTA CGGCTCAGGG TTCCACAGCT CCATCCAGCG GTCGTTCTTG GGAGGAAGAA GGCCACAGAA CGTCTGAGGG TCAGCCTCGT CAAGAAATGA GCGAAGCTCC GTTTGAGGAT ACAACAGAAC AGAAAATTCT CGAGTTGGAT GTTGCGAAGA TGGAAGAGCA GATCTATCAT CTCCGAATCT TTTGTACCAA AGGACCCGGT GTATTTGTGC AATTGATGCA ATCTTTGGAG GCCTTGGGTC TTGAAATACG CAATGCCAAT CTGACATCAT TCCAAGAAAA TTTACTGAAC ACCTTCATTG CAGAGATCAA AGACTGGGAG ATGATGAAGA CCGAAGAGGT TAAGAAGGCC ATTCTGGATG TGGCTGCTCG TTTTGGTCTG CAACCTTAA |
Protein |
| >Mp2g00510.1 MDKKPLIIPG DNRLDSSQNL HHSVLVGAAH EMFQSGHGLG TSSNMTPGSM CNLHPPLSSF GAESNLHELL AHASPHAGSH AQSLNHSSNH PADFLATLGD GVLGESSDNH MFHRQMEFSK QKWTTPSKLT PGPFWMLPHH LDPANYPLPG LAVSGTSSPK TNVGPSAGED SSNPNRQVWC ERGANQVLMK SEDNVATLKL PMVVKPDRSL LCDGSGAPVD SPKGANGNLI NRDTSDMDAK QLDSSDCSDH NMDEQEEKDQ ATRNGAGRTV SKNLVSERKR RKKLNDGLYT LRALVPKISK MDKASIVGDA IDYVRELQKQ VEELQADISD IESTKPTTGP GGEASLSSVA EPSTAQGSTA PSSGRSWEEE GHRTSEGQPR QEMSEAPFED TTEQKILELD VAKMEEQIYH LRIFCTKGPG VFVQLMQSLE ALGLEIRNAN LTSFQENLLN TFIAEIKDWE MMKTEEVKKA ILDVAARFGL QP |