Mp2g03080
Description
Annotation
| Database | ID | Description |
|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| Pfam | PF01086 | Clathrin light chain |
| Coils | Coil | Coil |
| PANTHER | PTHR10639 | CLATHRIN LIGHT CHAIN |
| MapolyID | Mapoly0075s0069 | - |
| GO | GO:0016192 | vesicle-mediated transport |
| GO | GO:0072583 | clathrin-dependent endocytosis |
| GO | GO:0005198 | structural molecule activity |
| GO | GO:0006886 | intracellular protein transport |
| GO | GO:0005886 | plasma membrane |
| GO | GO:0030130 | clathrin coat of trans-Golgi network vesicle |
| GO | GO:0030125 | clathrin vesicle coat |
| GO | GO:0030132 | clathrin coat of coated pit |
| GO | GO:0032050 | clathrin heavy chain binding |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpCLC1 | clatrin coat | Provisional |
Associated Literature (AI-based literature mining, Beta-version)
Clathrin light chain; localizes to PM/TGN/cell plates and dynamic foci at the oil body membrane; EM shows clathrin-coated vesicles budding from it.
1 core 1 peripheral
Kanazawa, T., et al. (2020)
· Nature Communications research experimental subject
Clathrin light chain; localizes to PM/TGN/cell plates and dynamic foci at the oil body membrane; EM shows clathrin-coated vesicles budding from it.
Bowman, J. L., et al. (2022)
· Plant Cell review citation comparator
Marchantia gene cited in Bowman et al. (2022) model-system review
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp2g03080 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp2g03080.1 AAGGGGAGAG CGAACGAGAC GAAAGAGCGG AGCCCTGAGC TTGGACAGGA CCGTCGACCG CCATAGCTCA GGAGCTGTGC TCCGCTGCGC ATTGTTTTGT TTGGAGCTCG TACGCGAGGG GAAGGGAGGC AGGCAGGCAG GCAGCAGGCA CGCACGCACC GCGCGAAGAG CAGAAGGAGC TCGATCGGAT CGCTCGGGCC ACGGGGTTCG CAGATCTCAG CATTGAAGGG CACAGGCGCG AGACCGCTGT TCGATCGGGC GCCCTGTGGC GTGCAGTGTG GTGGAAATAG GGGAATTTTG GAGGGCGTAG GTGTCGTAGC GTTAAGATCT GGCAGATCAC AGCTGCAGGT TTTGAGGGGT AGACGATGGC GGAGTTCGAG TATGGGGGCG GAGGCGAGGA TCTTAGTGGG ACTCGACCCT TCGAGTCCGA TTACATGGGT TATGATCCCA GGCTGCCGTC TCAGCGCTTC GATTCCTCGC AGAGGTTTGA TGAATCGTTC CGAGCACCCG ACCACTTCGC TCCGACCTTC GGCGACGAAG TGAAGGAAGA TGGAGAGGAC GAGTACAAGA GTGCCAATGG CTTCGGCTAC CACCACGCAG ATCCCCCGCC CAGCTATGGT TATGAGGACG ACGGTGCCGG CCGCCCCACC GAAGCTCCTT CGGCTTACGT ACCTACTTTC GAGCCAGATC TGCAGAATGA CTTCGGTGGA GAAGTGAATT ACTCATCCGC ACACCCTGTC TCAGGAAACG GCTTTGGCGC GAACGATGAC GATGATAACC TTTTCAGCAG TCTGCCTGCA GGAAACGGTC CAATTTTACC CGAGCCTGAA GATATGAGAG AAGAAGGTTT TGCGCTAAGG GAGTGGAAGC GGTAATGTCG AATGCACCTG AACTCTGATC CCCACAGCTC AGCTTGATAG TTCCCTTGGG GTTCCTCATC TTCTGTTTGC TTTTTGGCCT TGCATTGTTG CCGAGTGGTT TTTTCTGTTG TTTTGTGTTC CGATCTCGAG GCCCGCTCGG TTTAGTACTT TAAACTCGAT CCCCAGCTTC TTGAACAGGT GTTTAGGCGG ACTGATGCCC TTTAAAATTG TCCGTTAGCA CTTTATCTAG CTTATATTTT CGAACATATC ATCATAACAC TGGTTTGACA CGCATCCTTT TGTTTTTCTT ACTGGCAGTG AGAATGCTAT TCGTCTCGAA GAGAAGGAGA GGAAGGAGAG GGAGAAGCTT GCGCAAGTAA TCGAGGACGC AGACTATTAT AAGGACGAGG TGTACGTGAA GCGTAAGACG ACTATGGAGA ATGGAAGGAA AACTAATCGC GATAAGGAAA AGGTGGAATT TTTAAACGAC CATATTTCAA GTAGTAGTGT GGAAGTACCA GTTTGACTTT TTCACTCATT TCAGAAGATT GAATGATAGC CAGCTCTCGC ATCATGATCT GGATGTTTTT CTCTCGAGTA GGATGTATGT CTTGGTTCTT TGTGTGTCAG AGTCCATCCT TGATTCATTT CTCGAGCCCT TTACGCAACC CGTTGCTGAA TCACATTCTA CAGTCAAGTT ACCCTATCCT TCCATTTCGA AGTTTGCCAT CTTTGTCTAG GGGAACAATC TGCAAATCTT GAATTCATTT ATCGGTACTG TACTATTCTA TCCCTTCTTG GCATGAAGGA ACACCCAGCT CCTGAAGAAA TACCTGTGTC CATGTGTGCT CTCACGTCCA TAGTCCTGCT CTTGTCCCAT GAGCATGTTG CAGTGCGTAT TGCGTCTTAT CTGGTGTTGT GAACTTTGTT TGAGAGGTCT ACAGAGGTCA TAGTGGGCCC CCTCTTTCGG GACTATCCTG TACTTGTAAC AACTTTGCTG CCACTGTAGA TTTTATAGTT GCAAATACTA ACTTCAACTC CTTCAGTCAC ATGTAGATCC TGGATATCGT GGTGTACTAT CGTGTCGGGC GTCCGTATTC TTCTTTGTTT TCTATGAGTT TTCTGATCAT AGTAGGCAGT TGAGGCGAGT AGAGTTTTTG ATGATCTGGT TCTTTTCACT GTCGTTTTAA TTAACGGCTG CGGGTAACCG TAAAGTCATA AACGTCGAGC AGATGTTTTA TCTTTAGGTA TGATCTCAGG TACATGTTAG ATATACTCTT ATACTAAGAT CCTGGAACAG ATGATTACTT TTGAGGTATG ATCTCAGGTG CAAGTTAGAT ATACTACTAT GCCGGAATCC TGGACATTAG TGTCTCAATA GAATACATAG TGCAGATCGG CTACTCTCGA GTATCATGGA AACTCGTGAC GAGGTGTACT GGCGCTGACC TAGTTCCCTC GTTGTGCGCT GTTGATGTAT TGGCTTTTCT TTCTATTTTA CCCTCGCCAC GATCAGACTG TTCCGGTATT ATTCCATAGA CAGGTGCATG ATGATTGTGC ACGAACAATA TACACTTCAG CGATACGCGC ATAGTTGCCT CTAACGGGCT ACTGGGAATT TGTTTTTAGC GTTTGGGCTC GAGTCCCATA TACATCTTTT GTTTTACCAA CTCTAATTTG TTTTCTGGAT TTCATCTGTT CTTATTTCTG GATTTGGCAG ATACTTGATC AGCTAATACT AAGTATTTAA ATGCACGTCC TCGTCTATTT TATTTTGTTA CCTTTGCTTG TTGTGAGAGT GAGTAATTTT GGTGCGAACA TTCCATCACA TAGTACTTAG TGCAGGTAAA TAGAATAAAG TATGCGGGAA GATCCACTGT GTAGCCCTGA ATCGGATGGA TTCTGCCTCT GCTTCTAACA AAGGCGAATG CGACGTGGAA TTACGTGGTC ATGGCAGTGG ACAGAGAGCC AGTTTGAGAA CTAGTCCACA GGGGTAATTG TTCATCATGT CTTACCATCA GCTCCTGGAA CACATCTTTG TGTGTTTCGA TTCGACTAAT ATACGTGGAA GGTCTGCTGG TTCAAGAACA GCCGGAATTG ATTAATCTTG GCTGATTTAT TAATTCTTGT CAACCTTTTA ACCTACGTAA TACTATGTCG TTTTTGGGGC GGTACATTCA GAGGAAATGG GGGAAAACTT TACTTAGCTC TACGTAATAC TATGTCGTCT TTGGGGCGGT ACATTCAAAG GAAATGGGGG AAAACTTTAC TTAGCTCTAT GAGTCAGGAT GTCGTCTTTG ATCTGCTAGA TTCTTATACT AAGAAAGTGC TATGTTGAAT GCTACAGGTT TTTCTGACCA ACCAAGAAAA TTTCCACAAA AATGCTGATA AGCAGTACTG GAAAGCTGTA GCAGAGCTCA TTCCCAATGA GTTGCCAACT ATTGATACTA AAGGCCCCAC CAAAAAGGAC AAGAAGGACA AGGAGAGGAA GCCTTCGATT GTAGCCATCA AGGGTCCAAA GCCCGGCAAG CCTACAGATG TGACTAGAAT GCGACAAATC CTTGTGAAGC TGAAGCATAC TCCTCCCCCT CACATGAAGC CGCCACCACC ACCCCCAGCT CCAGTGGCCG AGAAGGACAA AGATGCGAAA GCAAAGGATA AGGACGGTAA GGAAGTGTTG GAGAAGGACG CTAAAGACAA GGACGCTAAG GATAAGGACG TTAAGGAGAA AGATGCCGCT GCTGTACCTG CAGAGGGTGA AGCTGCTGCT GCTGCCCCGG TAACTGAGGC TACGACTGAA CCCGAGACAC CAGCTCCAGC AGCAGCACCA GCGGCAGCAG CTGTGACTGC CTAAACTCAG GTGATATTGG TCGCAAGTAG CGTGATCACT TGCTTTCGTG TTCGTAACAG CACTGATTGT CTTTCTGGAA GGAGGTTCAC ACGAAGCAGG TGTCCCATTT TTCCATTTGT CTTCAACCAC CATTATGCTT GGCGCAGATA GAGAATATGG CATCATCAGA GGCCCACAGT TAACTTCATT TACAGAGACT GGGTTGACTA GGACATCACC ACTGTGGATT TGTGAAAATC ATGTACCTGC GATAATTTTT TTAGATGAGG CTGATCTCTT CTACTCAGAT TCTGGCAAGT AGACTACGAC GATCTTTGAG AGAGTGAAGA TTGAATGCCT TGCAGATCTT TGTTGTAAAG AGGAGGGAAG GGTCTGAATG AGATTCACAC ACCAGTATTT TTCTGTGGCG GGTAGGAGCA GGCAAGGCAG TTGGTTGTTG TATGCTCCAC ACCCCATGGG AGTTCTCGGG TTATCATAGC TGAACACACG CTGGAGGAGT CGTAATTCAT TCAGCATCTG CTTTATCTCC ATTTCTGATT GTCAAGTCCT TGTTCTTAAC AGGATGATCA TTCCCAAGAT GGAATGCCAA GTGTAATAAG AGGCATAGTC TAGGTTTGAG ATTCCTGAGT GAGTTCCTCA GGCACGAATG AGTTGCGTTC TAGGGTCTTA CTGTTACTGA TATATCTCGT AAACATAAAG TAAGTCACAT TGACCAATTT TCTCTGTCGC ATCAAGCTGT CAACATTTGA GTGAAGGCAA GTCAGATGTT TTGCCACTAA GTTTTGTGTA TTGAAACGTT CCGTACGAGA AGTATAGTGA CGGAGGTGGT CGCTTGGTGA GGCCAAACAT GCCTATAGAG AGCTCATGTT TGCTGGTCCC ACTTGCGTTC TAGGGTCTTA TTGTCACCGA TATGTATCGT AATCATAAAG TAAGTCACAT TGACCATTTC TCTCTGTCGC |
mRNA UTR + CDS |
| >Mp2g03080.1 AAGGGGAGAG CGAACGAGAC GAAAGAGCGG AGCCCTGAGC TTGGACAGGA CCGTCGACCG CCATAGCTCA GGAGCTGTGC TCCGCTGCGC ATTGTTTTGT TTGGAGCTCG TACGCGAGGG GAAGGGAGGC AGGCAGGCAG GCAGCAGGCA CGCACGCACC GCGCGAAGAG CAGAAGGAGC TCGATCGGAT CGCTCGGGCC ACGGGGTTCG CAGATCTCAG CATTGAAGGG CACAGGCGCG AGACCGCTGT TCGATCGGGC GCCCTGTGGC GTGCAGTGTG GTGGAAATAG GGGAATTTTG GAGGGCGTAG GTGTCGTAGC GTTAAGATCT GGCAGATCAC AGCTGCAGGT TTTGAGGGGT AGACGATGGC GGAGTTCGAG TATGGGGGCG GAGGCGAGGA TCTTAGTGGG ACTCGACCCT TCGAGTCCGA TTACATGGGT TATGATCCCA GGCTGCCGTC TCAGCGCTTC GATTCCTCGC AGAGGTTTGA TGAATCGTTC CGAGCACCCG ACCACTTCGC TCCGACCTTC GGCGACGAAG TGAAGGAAGA TGGAGAGGAC GAGTACAAGA GTGCCAATGG CTTCGGCTAC CACCACGCAG ATCCCCCGCC CAGCTATGGT TATGAGGACG ACGGTGCCGG CCGCCCCACC GAAGCTCCTT CGGCTTACGT ACCTACTTTC GAGCCAGATC TGCAGAATGA CTTCGGTGGA GAAGTGAATT ACTCATCCGC ACACCCTGTC TCAGGAAACG GCTTTGGCGC GAACGATGAC GATGATAACC TTTTCAGCAG TCTGCCTGCA GGAAACGGTC CAATTTTACC CGAGCCTGAA GATATGAGAG AAGAAGGTTT TGCGCTAAGG GAGTGGAAGC GTGAGAATGC TATTCGTCTC GAAGAGAAGG AGAGGAAGGA GAGGGAGAAG CTTGCGCAAG TAATCGAGGA CGCAGACTAT TATAAGGACG AGGTGTACGT GAAGCGTAAG ACGACTATGG AGAATGGAAG GAAAACTAAT CGCGATAAGG AAAAGGTTTT TCTGACCAAC CAAGAAAATT TCCACAAAAA TGCTGATAAG CAGTACTGGA AAGCTGTAGC AGAGCTCATT CCCAATGAGT TGCCAACTAT TGATACTAAA GGCCCCACCA AAAAGGACAA GAAGGACAAG GAGAGGAAGC CTTCGATTGT AGCCATCAAG GGTCCAAAGC CCGGCAAGCC TACAGATGTG ACTAGAATGC GACAAATCCT TGTGAAGCTG AAGCATACTC CTCCCCCTCA CATGAAGCCG CCACCACCAC CCCCAGCTCC AGTGGCCGAG AAGGACAAAG ATGCGAAAGC AAAGGATAAG GACGGTAAGG AAGTGTTGGA GAAGGACGCT AAAGACAAGG ACGCTAAGGA TAAGGACGTT AAGGAGAAAG ATGCCGCTGC TGTACCTGCA GAGGGTGAAG CTGCTGCTGC TGCCCCGGTA ACTGAGGCTA CGACTGAACC CGAGACACCA GCTCCAGCAG CAGCACCAGC GGCAGCAGCT GTGACTGCCT AAACTCAGGT GATATTGGTC GCAAGTAGCG TGATCACTTG CTTTCGTGTT CGTAACAGCA CTGATTGTCT TTCTGGAAGG AGGTTCACAC GAAGCAGGTG TCCCATTTTT CCATTTGTCT TCAACCACCA TTATGCTTGG CGCAGATAGA GAATATGGCA TCATCAGAGG CCCACAGTTA ACTTCATTTA CAGAGACTGG GTTGACTAGG ACATCACCAC TGTGGATTTG TGAAAATCAT GTACCTGCGA TAATTTTTTT AGATGAGGCT GATCTCTTCT ACTCAGATTC TGGCAAGTAG ACTACGACGA TCTTTGAGAG AGTGAAGATT GAATGCCTTG CAGATCTTTG TTGTAAAGAG GAGGGAAGGG TCTGAATGAG ATTCACACAC CAGTATTTTT CTGTGGCGGG TAGGAGCAGG CAAGGCAGTT GGTTGTTGTA TGCTCCACAC CCCATGGGAG TTCTCGGGTT ATCATAGCTG AACACACGCT GGAGGAGTCG TAATTCATTC AGCATCTGCT TTATCTCCAT TTCTGATTGT CAAGTCCTTG TTCTTAACAG GATGATCATT CCCAAGATGG AATGCCAAGT GTAATAAGAG GCATAGTCTA GGTTTGAGAT TCCTGAGTGA GTTCCTCAGG CACGAATGAG TTGCGTTCTA GGGTCTTACT GTTACTGATA TATCTCGTAA ACATAAAGTA AGTCACATTG ACCAATTTTC TCTGTCGCAT CAAGCTGTCA ACATTTGAGT GAAGGCAAGT CAGATGTTTT GCCACTAAGT TTTGTGTATT GAAACGTTCC GTACGAGAAG TATAGTGACG GAGGTGGTCG CTTGGTGAGG CCAAACATGC CTATAGAGAG CTCATGTTTG CTGGTCCCAC TTGCGTTCTA GGGTCTTATT GTCACCGATA TGTATCGTAA TCATAAAGTA AGTCACATTG ACCATTTCTC TCTGTCGC |
CDS |
| >Mp2g03080.1 ATGGCGGAGT TCGAGTATGG GGGCGGAGGC GAGGATCTTA GTGGGACTCG ACCCTTCGAG TCCGATTACA TGGGTTATGA TCCCAGGCTG CCGTCTCAGC GCTTCGATTC CTCGCAGAGG TTTGATGAAT CGTTCCGAGC ACCCGACCAC TTCGCTCCGA CCTTCGGCGA CGAAGTGAAG GAAGATGGAG AGGACGAGTA CAAGAGTGCC AATGGCTTCG GCTACCACCA CGCAGATCCC CCGCCCAGCT ATGGTTATGA GGACGACGGT GCCGGCCGCC CCACCGAAGC TCCTTCGGCT TACGTACCTA CTTTCGAGCC AGATCTGCAG AATGACTTCG GTGGAGAAGT GAATTACTCA TCCGCACACC CTGTCTCAGG AAACGGCTTT GGCGCGAACG ATGACGATGA TAACCTTTTC AGCAGTCTGC CTGCAGGAAA CGGTCCAATT TTACCCGAGC CTGAAGATAT GAGAGAAGAA GGTTTTGCGC TAAGGGAGTG GAAGCGTGAG AATGCTATTC GTCTCGAAGA GAAGGAGAGG AAGGAGAGGG AGAAGCTTGC GCAAGTAATC GAGGACGCAG ACTATTATAA GGACGAGGTG TACGTGAAGC GTAAGACGAC TATGGAGAAT GGAAGGAAAA CTAATCGCGA TAAGGAAAAG GTTTTTCTGA CCAACCAAGA AAATTTCCAC AAAAATGCTG ATAAGCAGTA CTGGAAAGCT GTAGCAGAGC TCATTCCCAA TGAGTTGCCA ACTATTGATA CTAAAGGCCC CACCAAAAAG GACAAGAAGG ACAAGGAGAG GAAGCCTTCG ATTGTAGCCA TCAAGGGTCC AAAGCCCGGC AAGCCTACAG ATGTGACTAG AATGCGACAA ATCCTTGTGA AGCTGAAGCA TACTCCTCCC CCTCACATGA AGCCGCCACC ACCACCCCCA GCTCCAGTGG CCGAGAAGGA CAAAGATGCG AAAGCAAAGG ATAAGGACGG TAAGGAAGTG TTGGAGAAGG ACGCTAAAGA CAAGGACGCT AAGGATAAGG ACGTTAAGGA GAAAGATGCC GCTGCTGTAC CTGCAGAGGG TGAAGCTGCT GCTGCTGCCC CGGTAACTGA GGCTACGACT GAACCCGAGA CACCAGCTCC AGCAGCAGCA CCAGCGGCAG CAGCTGTGAC TGCCTAA |
Protein |
| >Mp2g03080.1 MAEFEYGGGG EDLSGTRPFE SDYMGYDPRL PSQRFDSSQR FDESFRAPDH FAPTFGDEVK EDGEDEYKSA NGFGYHHADP PPSYGYEDDG AGRPTEAPSA YVPTFEPDLQ NDFGGEVNYS SAHPVSGNGF GANDDDDNLF SSLPAGNGPI LPEPEDMREE GFALREWKRE NAIRLEEKER KEREKLAQVI EDADYYKDEV YVKRKTTMEN GRKTNRDKEK VFLTNQENFH KNADKQYWKA VAELIPNELP TIDTKGPTKK DKKDKERKPS IVAIKGPKPG KPTDVTRMRQ ILVKLKHTPP PHMKPPPPPP APVAEKDKDA KAKDKDGKEV LEKDAKDKDA KDKDVKEKDA AAVPAEGEAA AAAPVTEATT EPETPAPAAA PAAAAVTA |