Mp2g05060



Description

Annotation

Database ID Description
KOG KOG1677 CCCH-type Zn-finger protein; N-term missing; C-term missing; [R]
KOG KOG1677 CCCH-type Zn-finger protein; N-term missing; C-term missing; [R]
KOG KOG2191 RNA-binding protein NOVA1/PASILLA and related KH domain proteins; N-term missing; C-term missing; [AR]
KOG KOG1677 CCCH-type Zn-finger protein; N-term missing; C-term missing; [R]
SUPERFAMILY SSF90229 CCCH zinc finger
ProSiteProfiles PS50084 Type-1 KH domain profile.
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:4.10.1000.10 CCCH zinc finger
ProSiteProfiles PS50103 Zinc finger C3H1-type profile.
Pfam PF00013 KH domain
SUPERFAMILY SSF54791 Eukaryotic type KH-domain (KH-domain type I)
Pfam PF14608 RNA-binding, Nab2-type zinc finger
Pfam PF00642 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
CDD cd00105 KH-I
PANTHER PTHR12547:SF124 ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 52
SMART SM00356 c3hfinal6
PANTHER PTHR12547 CCCH ZINC FINGER/TIS11-RELATED
Gene3D G3DSA:3.30.1370.10 -
SMART SM00322 kh_6
MapolyID Mapoly0031s0160 -

Nomenclature

Gene symbol Product Transcript ID Status
MpC3H8 transcription factor, C3H Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g05060.1 chr2:5305959..5312299 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.