Mp2g07750



Description

Annotation

Database ID Description
FunFam G3DSA:1.10.238.10:FF:000073 calcineurin B-like protein 3
ProSiteProfiles PS50222 EF-hand calcium-binding domain profile.
SUPERFAMILY SSF47473 EF-hand
CDD cd00051 EFh
PRINTS PR00450 Recoverin family signature
Pfam PF13202 EF hand
SMART SM00054 efh_1
Pfam PF13499 EF-hand domain pair
Gene3D G3DSA:1.10.238.10 -
PANTHER PTHR23056 CALCINEURIN B
KEGG K06268 serine/threonine-protein phosphatase 2B regulatory subunit
KOG KOG0034 Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein; [T]
MapolyID Mapoly0015s0061 -
GO GO:0019722 calcium-mediated signaling
GO GO:0005509 calcium ion binding
GO GO:0019900 kinase binding

Nomenclature

Gene symbol Product Transcript ID Status
MpCBL-A Calcineurin B-like protein Published

Associated Literature (AI-based literature mining, Beta-version)

Calcineurin B-like protein (from nomenclature)

0 core 1 peripheral

Tansley, C., et al. (2023) · New Phytologist  research experimental tool
Calcineurin B-like protein analyzed by phylogeny, expression, and interaction assays. Groups with tonoplast Arabidopsis CBLs but lacks the localization motif; downregulated by salt yet upregulated by osmotic stress; interacts with both MpCIPKs in planta.

Transcript models

Transcript ID Location Sequences Extract region
Mp2g07750.1 chr2:8690599..8698531 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g07750 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g07750 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.