Mp2g08740
Description
Annotation
| Database | ID | Description |
|---|---|---|
| Pfam | PF00704 | Glycosyl hydrolases family 18 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases |
| PANTHER | PTHR45708 | ENDOCHITINASE |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases |
| KOG | KOG4701 | Chitinase; C-term missing; [M] |
| MapolyID | Mapoly0015s0159 | - |
| GO | GO:0005576 | extracellular region |
| GO | GO:0005975 | carbohydrate metabolic process |
| GO | GO:0004568 | chitinase activity |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpGH18.4 | Cell wall related protein | Provisional |
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp2g08740 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp2g08740.1 CAAACCGCTG CACGAGAAGT CACCGAGATT CCTGTAATGC AGACATCTTA AACGAAGATT GACTCTTTAT CCTCCGAGCT GACGGAAGTG AAGCGACGTC GCTTCAGAAC CTGAAACCTG CATCACAAAA TTTCTCATGG TCTCTGCTTC CTCTGCTCGG CCAGGAGCTT AGGCTGCTGC TTTGAAAGCA TGTCCATCTA ATCTCTAGCT TCACATGAAT TGGGCTTTTA ATTGGATTTG AAAGATGGAT CGGAGATTCA TGTCTGCTCG AAAGGTTGAG TTCGGTATTC TTGCGTTGAT GGTGCTGATT TCGCATCATG CCATTCAGAC ATTCGGAGCA GGTCAGGTCG TAGGCTACTG GGGCCAAGAA GGCGACGACA AAACGGAAGG TTCTCTGGCT GCGCTCTGCG CGTCTGGCAA CTACGGCATT GTGATCATAG CATACCTCTC AAAATTCGGC CGAAACCAGT CTCCCGTGCT CGATCTGGGA GGCCACTGCG ATGCTCCGAC GGGAGCGTGT CAGCGCTACG CCTCGGAAAT TGCGACATGC CAGAAACGAG GCATCAGGGT GCTGCTCTCT CTGGGAGGAG AAGTGGGGGG CTACGGCTTC GACACGGCCG ACGAAGCCCG GCTGCTGGCG CAAGACATCT GGGACAACTA CATGGGAGGC AGCTCGAGCA ATAGCCCGCT GGGGGAGGTG AATTTGGATG GTCTCGACCT GCGGATTTTC AGTGGAGGCC ACAGGTTTTA CGCGGATTTG GGAGGACGGC TGCGCGAGAT CGCCCAGGAC AACCAGTACA AGTATTTGTA CTTCGGCGTG TCTCCTCAGT GCCCCTGCCC CGATCCCTCT CTGGGTCCTG ACTCGGCGGG CAAGTTCATG GAGACGAATT TGGTGGATCT CGTGTTCGTG CAGTTCTATA ACAACCCTGG ATGTGATATT CGGGGCGGGA TCGATGACCT TGTGAGATCG TGGAGCAATT GGATCACCAG GATCACGGCT TCGAAACCGG CCTTTTACAT ATCCCTCCCT GCGAGCCCCT CGGCCGGCGA AGGGTTCATT GACACGAAGA CTCTCAAAGA CAGTGTTGTA CCATCTATCA AGACTATTGG AAATTACAGT GGGGTTGCGC TCTGGGCACC CAGTACGAAT AGAACATTTG CGGCGAGTAT CAAGAGCATT GTCTAGTTGC GTCGCTGTCT TTGAGGATGG TGAAAGACTG GCTAGAGAAT ATCTCGTGGT CATGGGACAA AGCACTTTGT AAAGACTTGC ACTCCTGAAC CTGCCGACAT CCTGGATGCG GAAATCCAGA TCCTCCACGA AGAACCAGTC GAAGTGGGAC TTTGATTGCT TTCTGTTGAA TAATGAATTG CCCACACACT TAGACCAACT CTTTCTCATG AGTTTACGTG GATTTTGAAG GACTTTCATT CAGTACGCAA GTTCACTGAT GTTCAGCTTA TCACTAGCTG TACATTCTAC TCTCTGCAGA TTCATTATCT GTATATATCT TCTATCTTCT TTCTTCGTAA TTATCCGCTC CTCGAGCAAG CAAAGTGAAA TCTGGCCGCG CTTGCTGCAC AGGCAGGAAG TAATTGTAAT GTCACACATT ACTAATGTGT GAGGCGGATG TGCCCATATC AGTGTCATAT CTATGGCCAT CAGAGTTGAG TAATATAGCG CCGGTGCTGA GTGGAATGTA AAATCAGAAT CATATTTATG TAAATGTAGG TCTCCTCTCG TTGCTCTTGC TGGTAGGCAC CGATCGCCTC CGCGAGGTCA AAGGGGAAAT TGTGCTCGCA CATCCTGAAT AAAAGAAAAA TCCTTCCTGG |
mRNA UTR + CDS |
| >Mp2g08740.1 CAAACCGCTG CACGAGAAGT CACCGAGATT CCTGTAATGC AGACATCTTA AACGAAGATT GACTCTTTAT CCTCCGAGCT GACGGAAGTG AAGCGACGTC GCTTCAGAAC CTGAAACCTG CATCACAAAA TTTCTCATGG TCTCTGCTTC CTCTGCTCGG CCAGGAGCTT AGGCTGCTGC TTTGAAAGCA TGTCCATCTA ATCTCTAGCT TCACATGAAT TGGGCTTTTA ATTGGATTTG AAAGATGGAT CGGAGATTCA TGTCTGCTCG AAAGGTTGAG TTCGGTATTC TTGCGTTGAT GGTGCTGATT TCGCATCATG CCATTCAGAC ATTCGGAGCA GGTCAGGTCG TAGGCTACTG GGGCCAAGAA GGCGACGACA AAACGGAAGG TTCTCTGGCT GCGCTCTGCG CGTCTGGCAA CTACGGCATT GTGATCATAG CATACCTCTC AAAATTCGGC CGAAACCAGT CTCCCGTGCT CGATCTGGGA GGCCACTGCG ATGCTCCGAC GGGAGCGTGT CAGCGCTACG CCTCGGAAAT TGCGACATGC CAGAAACGAG GCATCAGGGT GCTGCTCTCT CTGGGAGGAG AAGTGGGGGG CTACGGCTTC GACACGGCCG ACGAAGCCCG GCTGCTGGCG CAAGACATCT GGGACAACTA CATGGGAGGC AGCTCGAGCA ATAGCCCGCT GGGGGAGGTG AATTTGGATG GTCTCGACCT GCGGATTTTC AGTGGAGGCC ACAGGTTTTA CGCGGATTTG GGAGGACGGC TGCGCGAGAT CGCCCAGGAC AACCAGTACA AGTATTTGTA CTTCGGCGTG TCTCCTCAGT GCCCCTGCCC CGATCCCTCT CTGGGTCCTG ACTCGGCGGG CAAGTTCATG GAGACGAATT TGGTGGATCT CGTGTTCGTG CAGTTCTATA ACAACCCTGG ATGTGATATT CGGGGCGGGA TCGATGACCT TGTGAGATCG TGGAGCAATT GGATCACCAG GATCACGGCT TCGAAACCGG CCTTTTACAT ATCCCTCCCT GCGAGCCCCT CGGCCGGCGA AGGGTTCATT GACACGAAGA CTCTCAAAGA CAGTGTTGTA CCATCTATCA AGACTATTGG AAATTACAGT GGGGTTGCGC TCTGGGCACC CAGTACGAAT AGAACATTTG CGGCGAGTAT CAAGAGCATT GTCTAGTTGC GTCGCTGTCT TTGAGGATGG TGAAAGACTG GCTAGAGAAT ATCTCGTGGT CATGGGACAA AGCACTTTGT AAAGACTTGC ACTCCTGAAC CTGCCGACAT CCTGGATGCG GAAATCCAGA TCCTCCACGA AGAACCAGTC GAAGTGGGAC TTTGATTGCT TTCTGTTGAA TAATGAATTG CCCACACACT TAGACCAACT CTTTCTCATG AGTTTACGTG GATTTTGAAG GACTTTCATT CAGTACGCAA GTTCACTGAT GTTCAGCTTA TCACTAGCTG TACATTCTAC TCTCTGCAGA TTCATTATCT GTATATATCT TCTATCTTCT TTCTTCGTAA TTATCCGCTC CTCGAGCAAG CAAAGTGAAA TCTGGCCGCG CTTGCTGCAC AGGCAGGAAG TAATTGTAAT GTCACACATT ACTAATGTGT GAGGCGGATG TGCCCATATC AGTGTCATAT CTATGGCCAT CAGAGTTGAG TAATATAGCG CCGGTGCTGA GTGGAATGTA AAATCAGAAT CATATTTATG TAAATGTAGG TCTCCTCTCG TTGCTCTTGC TGGTAGGCAC CGATCGCCTC CGCGAGGTCA AAGGGGAAAT TGTGCTCGCA CATCCTGAAT AAAAGAAAAA TCCTTCCTGG |
CDS |
| >Mp2g08740.1 ATGGATCGGA GATTCATGTC TGCTCGAAAG GTTGAGTTCG GTATTCTTGC GTTGATGGTG CTGATTTCGC ATCATGCCAT TCAGACATTC GGAGCAGGTC AGGTCGTAGG CTACTGGGGC CAAGAAGGCG ACGACAAAAC GGAAGGTTCT CTGGCTGCGC TCTGCGCGTC TGGCAACTAC GGCATTGTGA TCATAGCATA CCTCTCAAAA TTCGGCCGAA ACCAGTCTCC CGTGCTCGAT CTGGGAGGCC ACTGCGATGC TCCGACGGGA GCGTGTCAGC GCTACGCCTC GGAAATTGCG ACATGCCAGA AACGAGGCAT CAGGGTGCTG CTCTCTCTGG GAGGAGAAGT GGGGGGCTAC GGCTTCGACA CGGCCGACGA AGCCCGGCTG CTGGCGCAAG ACATCTGGGA CAACTACATG GGAGGCAGCT CGAGCAATAG CCCGCTGGGG GAGGTGAATT TGGATGGTCT CGACCTGCGG ATTTTCAGTG GAGGCCACAG GTTTTACGCG GATTTGGGAG GACGGCTGCG CGAGATCGCC CAGGACAACC AGTACAAGTA TTTGTACTTC GGCGTGTCTC CTCAGTGCCC CTGCCCCGAT CCCTCTCTGG GTCCTGACTC GGCGGGCAAG TTCATGGAGA CGAATTTGGT GGATCTCGTG TTCGTGCAGT TCTATAACAA CCCTGGATGT GATATTCGGG GCGGGATCGA TGACCTTGTG AGATCGTGGA GCAATTGGAT CACCAGGATC ACGGCTTCGA AACCGGCCTT TTACATATCC CTCCCTGCGA GCCCCTCGGC CGGCGAAGGG TTCATTGACA CGAAGACTCT CAAAGACAGT GTTGTACCAT CTATCAAGAC TATTGGAAAT TACAGTGGGG TTGCGCTCTG GGCACCCAGT ACGAATAGAA CATTTGCGGC GAGTATCAAG AGCATTGTCT AG |
Protein |
| >Mp2g08740.1 MDRRFMSARK VEFGILALMV LISHHAIQTF GAGQVVGYWG QEGDDKTEGS LAALCASGNY GIVIIAYLSK FGRNQSPVLD LGGHCDAPTG ACQRYASEIA TCQKRGIRVL LSLGGEVGGY GFDTADEARL LAQDIWDNYM GGSSSNSPLG EVNLDGLDLR IFSGGHRFYA DLGGRLREIA QDNQYKYLYF GVSPQCPCPD PSLGPDSAGK FMETNLVDLV FVQFYNNPGC DIRGGIDDLV RSWSNWITRI TASKPAFYIS LPASPSAGEG FIDTKTLKDS VVPSIKTIGN YSGVALWAPS TNRTFAASIK SIV |