Mp2g10420



Description

Annotation

Database ID Description
ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature.
Gene3D G3DSA:1.10.630.10 Cytochrome P450
Pfam PF00067 Cytochrome P450
PANTHER PTHR24286 CYTOCHROME P450 26
SUPERFAMILY SSF48264 Cytochrome P450
PRINTS PR00463 E-class P450 group I signature
KOG KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies; [QI]
MapolyID Mapoly0023s0011 -
GO GO:0005506 iron ion binding
GO GO:0004497 monooxygenase activity
GO GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO GO:0020037 heme binding
GO GO:0016125 sterol metabolic process
GO GO:0016491 oxidoreductase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpKAOL3 Cytochrome P450, putative ent-kaurenoic acid oxidase, CYP88 family member Published

Associated Literature (AI-based literature mining, Beta-version)

Cytochrome P450, putative ent-kaurenoic acid oxidase, CYP88 family member; genome paper: Mapoly0023s0011 (from nomenclature)

0 core 1 peripheral

Sun, R., et al. (2023) · Plant Cell  research experimental comparator
Homolog whose complete-deletion mutant Mp_kaol3ld produced no GA12 and showed no severe FR-response defect, lacking MpKAOL1's activity.

Transcript models

Transcript ID Location Sequences Extract region
Mp2g10420.1 chr2:11458592..11462493 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g10420 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g10420 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.