Mp2g10950



Description

Annotation

Database ID Description
Pfam PF04101 Glycosyltransferase family 28 C-terminal domain
CDD cd17507 GT28_Beta-DGS-like
SUPERFAMILY SSF53756 UDP-Glycosyltransferase/glycogen phosphorylase
PANTHER PTHR43025 MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE
Pfam PF06925 Monogalactosyldiacylglycerol (MGDG) synthase
Gene3D G3DSA:3.40.50.2000 Glycogen Phosphorylase B;
KEGG K03715 1,2-diacylglycerol 3-beta-galactosyltransferase [EC:2.4.1.46]
KEGG K03429 processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
KOG KOG3349 Predicted glycosyltransferase; C-term missing; [R]
MapolyID Mapoly0023s0061 -
GO GO:0009247 glycolipid biosynthetic process
GO GO:0016758 hexosyltransferase activity

Nomenclature

Gene symbol Product Transcript ID Status
MpMGDG lipid turnover protein Provisional

Associated Literature (AI-based literature mining, Beta-version)

lipid turnover protein (from nomenclature)

0 core 2 peripheral

Rico-Reséndiz, F., et al. (2020) · International Journal of Molecular Sciences  research sequence comparator
MGDG synthase in galactolipid biosynthesis; single homolog identified phylogenetically with conserved distribution across plant lineages.
Shimojo, M., et al. (2023) · Planta  research experimental background
MGDG synthase; qPCR showed expression rather suppressed under -Pi, unlike Arabidopsis type B MGDG synthases.

Transcript models

Transcript ID Location Sequences Extract region
Mp2g10950.1 chr2:11955685..11960883 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g10950.2 chr2:11955301..11960768 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g10950 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g10950 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.