Mp2g11080
Description
Annotation
| Database | ID | Description |
|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| Gene3D | G3DSA:3.30.730.10 | AP2/ERF domain |
| CDD | cd00018 | AP2 |
| SUPERFAMILY | SSF54171 | DNA-binding domain |
| PRINTS | PR00367 | Ethylene responsive element binding protein signature |
| SMART | SM00380 | rav1_2 |
| FunFam | G3DSA:3.30.730.10:FF:000001 | Ethylene-responsive transcription factor 2 |
| PANTHER | PTHR31194 | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR |
| Pfam | PF00847 | AP2 domain |
| ProSiteProfiles | PS51032 | AP2/ERF domain profile. |
| KEGG | K09286 | EREBP-like factor |
| MapolyID | Mapoly0023s0075 | - |
| GO | GO:0006355 | regulation of DNA-templated transcription |
| GO | GO:0003700 | DNA-binding transcription factor activity |
| GO | GO:0003677 | DNA binding |
Nomenclature
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpERF4 | transcription factor, AP2/ERF | Published | |
| MpCRF | transcription factor, AP2/ERF | Provisional |
Associated Literature (AI-based literature mining, Beta-version)
transcription factor, AP2/ERF (from nomenclature)
0 core 1 peripheral
Aki, S. S., et al. (2019a)
· Plant & Cell Physiology research experimental background
MpCRF cytokinin response factor
Single-cell expression scRNA-seq atlas from Wang et al., 2023
Expression of Mp2g11080 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).
Gene structure:
Sequences: |
Gene UTR + CDS + intron |
| >Mp2g11080.1 TTCCTTCGCC CGCCACGACC GACCCGCTTG TAGCGCAGGG CAGCCGAGCT CCGAGCTCCG CCCACAAGTA GTAGAAGAAG AAGAAGGAGA TGAAGGACAA GTAGAAGAAG AAGAGAGTGA GCTCCACATC CATCTTGCCG GCTCGACATC TGCTCTGTAT TGTGTGGTGG GCTCCTCAGT CCTAGCCCCC AGTCCTGAAT ACCCCTCTTC GTCCCCCTCC TTCCCCCTTC CCCCCTCCCT TCCCCCACCA TCCTTACCAC CTTCCTTCCC TCCCTCCCTT TCTCCCTTCC TTCCGTCCTT CATCCCCCTC TCAGCCCCTT CCCCCCCCCC CAGCCTCTTG CAAAGTCGGG TCGAGAGAGG GAAAAGGAAG ATACTTCGCC CGCATCGCGA TCTCCAGCTT CGCTCGGTCG CTCACTCACC TCACTCACTC ACTCCCTCAC TCGCATGTGG AAAGACTTCG TCGAGCGAGA AAGAGAGAGA GAGAGAGTGT CAGTCAGATA GGATCATTAT CTTGTCGAAA AGCGCTTGCA ATCACCGCCA GCTTCGTCGG CCCTGCGAAA GAAGATAGAC CTGGTGTCTG TCGATTGACT AGAAGAAACC CACTCTTCGC CTCATCCCGC CTCTCCCTCT GCCCGCGCGC CCTCTCGCCC TCCCGCCTGC TTGTCTGCCT GCTCTGCTCT GCGCGCATTG CTGTCCTCGT CGCCAACGAA CGGCCTGCAT CATCTGCTCT CACCTTGCTC TGAAGCTCGC GCTCCCGTCT CACAGTAAGT GTCTCGACCC TCCTCCTGCT CCTCACGCTC ATGCTCGCCT TTTCCTCCCT CGTCGAAAAT CTCGCGATCA CCTCCCCCGT GGGGTTTCTC AGACATTTCC TTCCACCTGA GCTCGCTCGC TCGCTCCCAT TTCTTCCGCC TTCCTCAAAG TCCTCTCTCG AGTCCATCGC TGTCGACGAA GCTCGGGCGG CAGCTGTAGG AGAACTCTCT CGGCCTCATG TCCGGCCAGT CTTTCGCCTT CTAGTCGGAG GCGACTTCTC GTCTGGCGTC CATTTGTTCT CGTCTTCTCT CCCTCTCCAT CTCTTTAGCT CGAAATAGTG CCGAGCATCG GGTGCGTCCC CCGGAGCAGG GCATGCACTG GCAGTGTGAT TCATTCGGCT CTGGTGTGTT TGCTTGCCGC TCCAGCTTTC TCTTGCACCC AGGATGATTT TTTTCACCCA ACAAGATCTC GATGCGTGAC ATTAAATCAG CTCAATATCT TGGTACCCTG ACTTCTTTCT ACTCCGCGCT GCGCAAAACC CATCCCCACC CGAGTCTGTA CCCCAAAGCG CGATGTCTCT TGGCGCCTGT CGATGCTCGC ATGCAATGCT GTGTTTGTAA GCGGTCCCGT CAGCTAGCGA TGCCGGGACC AGAATCCGCC TCGTTTGTAT GCTCGCACTG ACGTCGCACG CATCTTTTGC AGGCTTCTTG ATTCGTCAAT CGACTCTACT TAATGCTGTG GCTTCCACTC GTCGAGACAG ACAACTGCGG GACGCTCAAT CACAGGAAGG GTTCTATCAC GGGGTCGTTG GAGCACAAGA GTGACCGCCA GGATGCCGGG CCCTCAGACG TACCCTAAGA TTATCAACAC CCTGATAAAG TCGAATGCGA AGGTGTGCCT CAAATCCTCG AAGCGCGACT ACTTGACCGA CTCGGACGAC GAGTGGACAG GACCCAAGCC GCAAGTGTGT CCCAAGAGGG TGCGAGTCAT CTGCACTGAT CCCGATGCCA CGGACTCGTC CAGCGACGAG GAAAGCAACT TCCGGGCCAA CCATCTCACC AAGTACGCGT ACAGAAGGCA TGTGCAGGAG ATTGACATTC GGGCCGACTG CTCCCCGTCT TCTTCCGACA GCGAGGATGA ACTGAGTTAC CACAGCGTGT TCACCGCGAG GGCTATGCAA TGCGGTTTCA ATTGCGCCAG CTTATCAGGG AATGCCGTCT ACGAGTCGAG CAGCAAGCAG TCGCAGGGGA CGTGGTTCTC CAAGAAAAAG GTGGACAAAG CCACCTCGAA GAAGGTCGTC AAGACTGTCA AGAAGAAGGT GGACGGCATT GAGAAGACGA GCACCTCCAA ATTCTTTTCC AAGTCTGCCA ATTCGAAGTC ACTGGCCGGT CGAGGGCGAG GCGGTGATGA GGGAAAGACT CACAAGTACA GGGGGGTCAG GCAACGACCC TGGGGCAAAT GGGCTGCGGA AATTAGGGAT CCTTCCAAGG GTGTTCGTCT CTGGCTCGGC ACTTATGATA CAGCTGAAGA GGCTGCACAG GCCTACGACA AGGCAGCTCG AACCATCAGG GGTCCGCAGG CGCACACGAA CTTCGCCGGG CTCTCGGACT CGGACAAAGC CGATGATCCG ACCGACGGCG AATTAAACGA AGCTCTCAAA TGCCATTCTG GCCCCACTGC TGAAGTAGAG ATCATCGAGC TCAAGTCCGA AGCAGAGACC GAAGGTGAGG GCGAGGACTG TCCATTCAAC CAGGACCTCG ATGATCCGAT TCATCTGTCC AGTGGAGTGG CTTCCGAAGT GTCCCTGAGC AGCAGCAAGT CGACAGGCGA GCCCAGCTGC TCGTCTCCCC GCAAGGGCAG CAATGCAGGA AGCTCGTCCA ACAAAGGGTC CAGCTCGCAA GCTCTCATTA CCTGTGAGGA CTTTCCCACA GTGGTAATGA CGGACGAAGA ATGTGGTTTC CTCGTGTGCT CGCCGTCCTC TGTTCTCGAC TGCTACCCAA CTCCGCTGTC CGAGTGCTCC CCAGGGAGAC AGTCTTCAGA GGTCAATACT TCTTCCAGCA GCTCGGTGGC CGATGACGGG GACCTGAATT ATCTGCATTC AGATATGGGG TCGGACGGGT ACCAAGTAGA TGGTGAATCT GACGATATTT CAGCACAACT CCAGATTGCC GACGAGCCCG AGTATACAGA CTCTGACATG GACTTGAAAG ATGCTGCTCC TGAAGGGCTG CAAGAAGACT CGACAGACTT CGTGCAAACC TATCTCACAG AGCCCGAAGG TCAAGACGAA TTTGTGTTCG ATTTCCCCCC CTGTGAAACC AGCAGCGCAA TGTCGTTCGA CTTCACAGGC TTTGACCTCC TGGGAGACGG CGGTGAAGAC ATAGCCGACT TCATCTTCGA ACCGGACAGC GGTTGGTTTG GCAATCTCAC CGACATTTCC GTTTCATGAG AAGCTTCCCA AACAGCGTTC TCTCTTACAT TTTTTTGGTA ATTGCAGTAC CTGCAGACCA TTCCATGGTG GTTGGCACGA TGGCTTTAGT TGAGACGAGA TATACATGAC TTAAGGAGAA ATGTGATTTT TCCTGAAGGT TGCTTTTTTG CCCGAATTGC AGCGAGCGTT GCTCTTTTAG ATTCCCCCCC TCCCACCCGT CGGCTTATCC TTGAGTACAT ATGTTCCCTC ATCAGGGACA TGAGATATTA GACGGAGACT TCACCCTCTT AACCAGTCCA GACACCGTGA CAGGACGCTA GTGGCCAAGC TTCCTTCTGC TTGAACTTCT TTCGATCCAA AGCCACTTCG TCTTGCGAGC GTCTGGAAAC TGGGGTTCTC TCGACCACAT ATGAGAGGGA ATCTAGACCG GTGGTTTCCT GAGTATTAAG ATTTATGTTG GCTACATTAC TACCCCGAAG GTTACCCTTT ACCTACACAA TTAGTTCATT CTTTTCAACA CTTGATCCAA TCGCCCATGG GGAAGATGGG TTATATAACA AGTGACGGCA TAACCAGTTT TGCAGAAGAA TTTTGTTGAT TTGTTTTCAT GTACAACGCC CTCTTAGTAT AACTGACCTT GGCAACTTAA AGACTGAGGG CTTATTTCTA GTACCAGCAC CCCCATTTGT AGTCGGGGAT GATCTATGAG CTTACTATAT GGTTGCTTGG TATTAACGTG CAACCAAGCC GGCAACCTTT ACTCTATGTT TAATTTTTGA TTGTAAGCAA GGAACTCTTC AGAGTGGCAA ACGTGCTAGA CTGTTATTTC TG |
mRNA UTR + CDS |
| >Mp2g11080.1 TTCCTTCGCC CGCCACGACC GACCCGCTTG TAGCGCAGGG CAGCCGAGCT CCGAGCTCCG CCCACAAGTA GTAGAAGAAG AAGAAGGAGA TGAAGGACAA GTAGAAGAAG AAGAGAGTGA GCTCCACATC CATCTTGCCG GCTCGACATC TGCTCTGTAT TGTGTGGTGG GCTCCTCAGT CCTAGCCCCC AGTCCTGAAT ACCCCTCTTC GTCCCCCTCC TTCCCCCTTC CCCCCTCCCT TCCCCCACCA TCCTTACCAC CTTCCTTCCC TCCCTCCCTT TCTCCCTTCC TTCCGTCCTT CATCCCCCTC TCAGCCCCTT CCCCCCCCCC CAGCCTCTTG CAAAGTCGGG TCGAGAGAGG GAAAAGGAAG ATACTTCGCC CGCATCGCGA TCTCCAGCTT CGCTCGGTCG CTCACTCACC TCACTCACTC ACTCCCTCAC TCGCATGTGG AAAGACTTCG TCGAGCGAGA AAGAGAGAGA GAGAGAGTGT CAGTCAGATA GGATCATTAT CTTGTCGAAA AGCGCTTGCA ATCACCGCCA GCTTCGTCGG CCCTGCGAAA GAAGATAGAC CTGGTGTCTG TCGATTGACT AGAAGAAACC CACTCTTCGC CTCATCCCGC CTCTCCCTCT GCCCGCGCGC CCTCTCGCCC TCCCGCCTGC TTGTCTGCCT GCTCTGCTCT GCGCGCATTG CTGTCCTCGT CGCCAACGAA CGGCCTGCAT CATCTGCTCT CACCTTGCTC TGAAGCTCGC GCTCCCGTCT CACAGCTTCT TGATTCGTCA ATCGACTCTA CTTAATGCTG TGGCTTCCAC TCGTCGAGAC AGACAACTGC GGGACGCTCA ATCACAGGAA GGGTTCTATC ACGGGGTCGT TGGAGCACAA GAGTGACCGC CAGGATGCCG GGCCCTCAGA CGTACCCTAA GATTATCAAC ACCCTGATAA AGTCGAATGC GAAGGTGTGC CTCAAATCCT CGAAGCGCGA CTACTTGACC GACTCGGACG ACGAGTGGAC AGGACCCAAG CCGCAAGTGT GTCCCAAGAG GGTGCGAGTC ATCTGCACTG ATCCCGATGC CACGGACTCG TCCAGCGACG AGGAAAGCAA CTTCCGGGCC AACCATCTCA CCAAGTACGC GTACAGAAGG CATGTGCAGG AGATTGACAT TCGGGCCGAC TGCTCCCCGT CTTCTTCCGA CAGCGAGGAT GAACTGAGTT ACCACAGCGT GTTCACCGCG AGGGCTATGC AATGCGGTTT CAATTGCGCC AGCTTATCAG GGAATGCCGT CTACGAGTCG AGCAGCAAGC AGTCGCAGGG GACGTGGTTC TCCAAGAAAA AGGTGGACAA AGCCACCTCG AAGAAGGTCG TCAAGACTGT CAAGAAGAAG GTGGACGGCA TTGAGAAGAC GAGCACCTCC AAATTCTTTT CCAAGTCTGC CAATTCGAAG TCACTGGCCG GTCGAGGGCG AGGCGGTGAT GAGGGAAAGA CTCACAAGTA CAGGGGGGTC AGGCAACGAC CCTGGGGCAA ATGGGCTGCG GAAATTAGGG ATCCTTCCAA GGGTGTTCGT CTCTGGCTCG GCACTTATGA TACAGCTGAA GAGGCTGCAC AGGCCTACGA CAAGGCAGCT CGAACCATCA GGGGTCCGCA GGCGCACACG AACTTCGCCG GGCTCTCGGA CTCGGACAAA GCCGATGATC CGACCGACGG CGAATTAAAC GAAGCTCTCA AATGCCATTC TGGCCCCACT GCTGAAGTAG AGATCATCGA GCTCAAGTCC GAAGCAGAGA CCGAAGGTGA GGGCGAGGAC TGTCCATTCA ACCAGGACCT CGATGATCCG ATTCATCTGT CCAGTGGAGT GGCTTCCGAA GTGTCCCTGA GCAGCAGCAA GTCGACAGGC GAGCCCAGCT GCTCGTCTCC CCGCAAGGGC AGCAATGCAG GAAGCTCGTC CAACAAAGGG TCCAGCTCGC AAGCTCTCAT TACCTGTGAG GACTTTCCCA CAGTGGTAAT GACGGACGAA GAATGTGGTT TCCTCGTGTG CTCGCCGTCC TCTGTTCTCG ACTGCTACCC AACTCCGCTG TCCGAGTGCT CCCCAGGGAG ACAGTCTTCA GAGGTCAATA CTTCTTCCAG CAGCTCGGTG GCCGATGACG GGGACCTGAA TTATCTGCAT TCAGATATGG GGTCGGACGG GTACCAAGTA GATGGTGAAT CTGACGATAT TTCAGCACAA CTCCAGATTG CCGACGAGCC CGAGTATACA GACTCTGACA TGGACTTGAA AGATGCTGCT CCTGAAGGGC TGCAAGAAGA CTCGACAGAC TTCGTGCAAA CCTATCTCAC AGAGCCCGAA GGTCAAGACG AATTTGTGTT CGATTTCCCC CCCTGTGAAA CCAGCAGCGC AATGTCGTTC GACTTCACAG GCTTTGACCT CCTGGGAGAC GGCGGTGAAG ACATAGCCGA CTTCATCTTC GAACCGGACA GCGGTTGGTT TGGCAATCTC ACCGACATTT CCGTTTCATG AGAAGCTTCC CAAACAGCGT TCTCTCTTAC ATTTTTTTGG TAATTGCAGT ACCTGCAGAC CATTCCATGG TGGTTGGCAC GATGGCTTTA GTTGAGACGA GATATACATG ACTTAAGGAG AAATGTGATT TTTCCTGAAG GTTGCTTTTT TGCCCGAATT GCAGCGAGCG TTGCTCTTTT AGATTCCCCC CCTCCCACCC GTCGGCTTAT CCTTGAGTAC ATATGTTCCC TCATCAGGGA CATGAGATAT TAGACGGAGA CTTCACCCTC TTAACCAGTC CAGACACCGT GACAGGACGC TAGTGGCCAA GCTTCCTTCT GCTTGAACTT CTTTCGATCC AAAGCCACTT CGTCTTGCGA GCGTCTGGAA ACTGGGGTTC TCTCGACCAC ATATGAGAGG GAATCTAGAC CGGTGGTTTC CTGAGTATTA AGATTTATGT TGGCTACATT ACTACCCCGA AGGTTACCCT TTACCTACAC AATTAGTTCA TTCTTTTCAA CACTTGATCC AATCGCCCAT GGGGAAGATG GGTTATATAA CAAGTGACGG CATAACCAGT TTTGCAGAAG AATTTTGTTG ATTTGTTTTC ATGTACAACG CCCTCTTAGT ATAACTGACC TTGGCAACTT AAAGACTGAG GGCTTATTTC TAGTACCAGC ACCCCCATTT GTAGTCGGGG ATGATCTATG AGCTTACTAT ATGGTTGCTT GGTATTAACG TGCAACCAAG CCGGCAACCT TTACTCTATG TTTAATTTTT GATTGTAAGC AAGGAACTCT TCAGAGTGGC AAACGTGCTA GACTGTTATT TCTG |
CDS |
| >Mp2g11080.1 ATGCCGGGCC CTCAGACGTA CCCTAAGATT ATCAACACCC TGATAAAGTC GAATGCGAAG GTGTGCCTCA AATCCTCGAA GCGCGACTAC TTGACCGACT CGGACGACGA GTGGACAGGA CCCAAGCCGC AAGTGTGTCC CAAGAGGGTG CGAGTCATCT GCACTGATCC CGATGCCACG GACTCGTCCA GCGACGAGGA AAGCAACTTC CGGGCCAACC ATCTCACCAA GTACGCGTAC AGAAGGCATG TGCAGGAGAT TGACATTCGG GCCGACTGCT CCCCGTCTTC TTCCGACAGC GAGGATGAAC TGAGTTACCA CAGCGTGTTC ACCGCGAGGG CTATGCAATG CGGTTTCAAT TGCGCCAGCT TATCAGGGAA TGCCGTCTAC GAGTCGAGCA GCAAGCAGTC GCAGGGGACG TGGTTCTCCA AGAAAAAGGT GGACAAAGCC ACCTCGAAGA AGGTCGTCAA GACTGTCAAG AAGAAGGTGG ACGGCATTGA GAAGACGAGC ACCTCCAAAT TCTTTTCCAA GTCTGCCAAT TCGAAGTCAC TGGCCGGTCG AGGGCGAGGC GGTGATGAGG GAAAGACTCA CAAGTACAGG GGGGTCAGGC AACGACCCTG GGGCAAATGG GCTGCGGAAA TTAGGGATCC TTCCAAGGGT GTTCGTCTCT GGCTCGGCAC TTATGATACA GCTGAAGAGG CTGCACAGGC CTACGACAAG GCAGCTCGAA CCATCAGGGG TCCGCAGGCG CACACGAACT TCGCCGGGCT CTCGGACTCG GACAAAGCCG ATGATCCGAC CGACGGCGAA TTAAACGAAG CTCTCAAATG CCATTCTGGC CCCACTGCTG AAGTAGAGAT CATCGAGCTC AAGTCCGAAG CAGAGACCGA AGGTGAGGGC GAGGACTGTC CATTCAACCA GGACCTCGAT GATCCGATTC ATCTGTCCAG TGGAGTGGCT TCCGAAGTGT CCCTGAGCAG CAGCAAGTCG ACAGGCGAGC CCAGCTGCTC GTCTCCCCGC AAGGGCAGCA ATGCAGGAAG CTCGTCCAAC AAAGGGTCCA GCTCGCAAGC TCTCATTACC TGTGAGGACT TTCCCACAGT GGTAATGACG GACGAAGAAT GTGGTTTCCT CGTGTGCTCG CCGTCCTCTG TTCTCGACTG CTACCCAACT CCGCTGTCCG AGTGCTCCCC AGGGAGACAG TCTTCAGAGG TCAATACTTC TTCCAGCAGC TCGGTGGCCG ATGACGGGGA CCTGAATTAT CTGCATTCAG ATATGGGGTC GGACGGGTAC CAAGTAGATG GTGAATCTGA CGATATTTCA GCACAACTCC AGATTGCCGA CGAGCCCGAG TATACAGACT CTGACATGGA CTTGAAAGAT GCTGCTCCTG AAGGGCTGCA AGAAGACTCG ACAGACTTCG TGCAAACCTA TCTCACAGAG CCCGAAGGTC AAGACGAATT TGTGTTCGAT TTCCCCCCCT GTGAAACCAG CAGCGCAATG TCGTTCGACT TCACAGGCTT TGACCTCCTG GGAGACGGCG GTGAAGACAT AGCCGACTTC ATCTTCGAAC CGGACAGCGG TTGGTTTGGC AATCTCACCG ACATTTCCGT TTCATGA |
Protein |
| >Mp2g11080.1 MPGPQTYPKI INTLIKSNAK VCLKSSKRDY LTDSDDEWTG PKPQVCPKRV RVICTDPDAT DSSSDEESNF RANHLTKYAY RRHVQEIDIR ADCSPSSSDS EDELSYHSVF TARAMQCGFN CASLSGNAVY ESSSKQSQGT WFSKKKVDKA TSKKVVKTVK KKVDGIEKTS TSKFFSKSAN SKSLAGRGRG GDEGKTHKYR GVRQRPWGKW AAEIRDPSKG VRLWLGTYDT AEEAAQAYDK AARTIRGPQA HTNFAGLSDS DKADDPTDGE LNEALKCHSG PTAEVEIIEL KSEAETEGEG EDCPFNQDLD DPIHLSSGVA SEVSLSSSKS TGEPSCSSPR KGSNAGSSSN KGSSSQALIT CEDFPTVVMT DEECGFLVCS PSSVLDCYPT PLSECSPGRQ SSEVNTSSSS SVADDGDLNY LHSDMGSDGY QVDGESDDIS AQLQIADEPE YTDSDMDLKD AAPEGLQEDS TDFVQTYLTE PEGQDEFVFD FPPCETSSAM SFDFTGFDLL GDGGEDIADF IFEPDSGWFG NLTDISVS |