Mp2g11480

Description

Annotation

Database	ID	Description
ProSitePatterns	PS01095	Glycosyl hydrolases family 18 (GH18) active site signature.
SUPERFAMILY	SSF51445	(Trans)glycosidases
Pfam	PF00704	Glycosyl hydrolases family 18
CDD	cd02877	GH18_hevamine_XipI_class_III
ProSiteProfiles	PS51910	Glycosyl hydrolases family 18 (GH18) domain profile.
PANTHER	PTHR45708	ENDOCHITINASE
Gene3D	G3DSA:3.20.20.80	Glycosidases
KOG	KOG4701	Chitinase; C-term missing; [M]
MapolyID	Mapoly0023s0114	-
GO	GO:0005576	extracellular region
GO	GO:0005975	carbohydrate metabolic process
GO	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
GO	GO:0004568	chitinase activity

Nomenclature

Gene symbol	Product	Transcript ID	Status
MpGH18.5	Cell wall related protein		Provisional

Transcript models

Transcript ID	Location	Sequences	Extract region
Mp2g11480.1	chr2:12391547..12393221 (+)	Gene / mRNA / CDS / Protein	FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g11480 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g11480 on UMAP — Feature plot (Seurat scale expression level).

UMAP cluster annotation — Cell-type annotation of the UMAP clusters.

Violin plot by developmental stage — Violin plot by stage. Expression across developmental time points (D0–D31).

Violin plot by cell cluster — Violin plot by cluster. Expression across cell clusters (1–21).

Mp2g11480.1

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA