Mp2g13910



Description

Annotation

Database ID Description
ProSiteProfiles PS50089 Zinc finger RING-type profile.
Gene3D G3DSA:4.10.1000.10 -
PANTHER PTHR11224 MAKORIN-RELATED
ProSitePatterns PS00518 Zinc finger RING-type signature.
ProSiteProfiles PS50103 Zinc finger C3H1-type profile.
Pfam PF00097 Zinc finger, C3HC4 type (RING finger)
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger)
SMART SM00356 c3hfinal6
SUPERFAMILY SSF57850 RING/U-box
Pfam PF00642 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
SUPERFAMILY SSF90229 CCCH zinc finger
Pfam PF14608 RNA-binding, Nab2-type zinc finger
SMART SM00184 ring_2
CDD cd16521 RING-HC_MKRN
KEGG K15687 E3 ubiquitin-protein ligase makorin [EC:2.3.2.27]
KOG KOG1039 Predicted E3 ubiquitin ligase; [O]
MapolyID Mapoly0042s0020 -
GO GO:0000209 protein polyubiquitination
GO GO:0061630 ubiquitin protein ligase activity
GO GO:0046872 metal ion binding
GO GO:0016567 protein ubiquitination

Nomenclature

Gene symbol Product Transcript ID Status
MpC3H10 transcription factor, C3H Provisional
This is a provisional entry. If you want to update the entry, please contact the administrator.

Transcript models

Transcript ID Location Sequences Extract region
Mp2g13910.1 chr2:15570955..15578377 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Expression Level powered by MBEX

Link to the original image in MBEX

Single-cell expression scRNA-seq atlas from Wang et al., 2023

Expression of Mp2g13910 across the single-cell RNA-seq atlas. Cluster identities (right) annotate the same UMAP used for the feature plot (left).

Feature plot of Mp2g13910 on UMAP
Feature plot (Seurat scale expression level).
UMAP cluster annotation
Cell-type annotation of the UMAP clusters.
Violin plot by developmental stage
Violin plot by stage. Expression across developmental time points (D0–D31).
Violin plot by cell cluster
Violin plot by cluster. Expression across cell clusters (1–21).

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.