Mp2g15880



Description

Annotation

Database ID Description
KEGG K22262 WD repeat and FYVE domain-containing protein 3
KOG KOG1788 Uncharacterized conserved protein; [S]
KOG KOG1786 Lysosomal trafficking regulator LYST and related BEACH and WD40 repeat proteins; [TU]
KOG KOG1409 Uncharacterized conserved protein, contains WD40 repeats and FYVE domains; N-term missing; [S]
SUPERFAMILY SSF50978 WD40 repeat-like
ProSiteProfiles PS51783 BEACH-type PH domain profile.
SMART SM00320 WD40_4
SMART SM01026 Beach_2
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00400 WD domain, G-beta repeat
CDD cd06071 Beach
Pfam PF02138 Beige/BEACH domain
ProSiteProfiles PS50178 Zinc finger FYVE/FYVE-related type profile.
Pfam PF14844 PH domain associated with Beige/BEACH
Gene3D G3DSA:2.60.120.200 -
ProSiteProfiles PS50197 BEACH domain profile.
ProSiteProfiles PS50082 Trp-Asp (WD) repeats profile.
Coils Coil Coil
PANTHER PTHR13743:SF146 BEACH DOMAIN-CONTAINING PROTEIN A2-RELATED
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
Gene3D G3DSA:1.25.10.10 -
SMART SM00064 fyve_4
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain
Gene3D G3DSA:2.130.10.10 -
SUPERFAMILY SSF48371 ARM repeat
CDD cd01201 PH_BEACH
Gene3D G3DSA:1.10.1540.10 BEACH domain
ProSiteProfiles PS50294 Trp-Asp (WD) repeats circular profile.
PANTHER PTHR13743 BEIGE/BEACH-RELATED
SUPERFAMILY SSF81837 BEACH domain
ProSitePatterns PS00678 Trp-Asp (WD) repeats signature.
SUPERFAMILY SSF49899 Concanavalin A-like lectins/glucanases
SUPERFAMILY SSF50729 PH domain-like
MapolyID Mapoly0082s0083 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSPIRRIG Provisional

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g15880.1 chr2:16770372..16790712 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.